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Information for unigene UN16250

FASTA Sequence
Unigene ID: UN16250Length: 523  SNP
TTTTTATAGAGCTGTCTCTATGAACCAACATTCCCACTGTTGGCTTATAAATACCTTTTCAAAACCAGAAGGCCACCACAAACTCA
ACACCGCACCACAAGCAAAACCACACAAATAATATTTTGACTAAATTTCTTCCAAGTGCAAAAGAGGAGGGATGGAGTCAATGAAG
ATGAAGCTTATGGTGGTGTTGACGGTGGCTATTGTGGCTTTCTCAGCCGTAGGAAATGTGGCGGCTCAGACAACAGAGTCTCCAGC
TCCAAGTCCTACTTCCGATGCTGCTGCTATGTTCGTCCCAGCATTGTTTGCATCTGTTGCTGCTTTGGCATCTGGGTTTCTCTTCT
AAACCAATCTCTACATACCATATAGAGTTATTGTTTGCTACTTCTTTTCTCTTTTCTTCTGTTTATTTTGTTATCGCATGAGCTTT
TTGTTATTGTTTCTAATATTTGGACTACTATATATTATATAATTTAATTTAAACTTTGGGTATTAATTAAATTGCATGAGACTGTT
TGTGTTT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_566458 arabinogalactan protein 12 [Arabidopsis thaliana]2462e-019
XP_002882829 hypothetical protein ARALYDRAFT_478739 [Arabidopsis lyrata subsp. lyrata]2353e-018
ABB97032 unknown [Brassica rapa]1914e-013
XP_002894500 hypothetical protein ARALYDRAFT_892530 [Arabidopsis lyrata subsp. lyrata]1808e-012
NP_564686 arabinogalactan protein 21 [Arabidopsis thaliana]1753e-011

Swiss-Prot top hits (Blast detail)Scoree value
Q9LJD9 Arabinogalactan peptide 122461e-020
Q9C8A4 Arabinogalactan peptide 211912e-014
Q9STQ3 Arabinogalactan peptide 131662e-011
Q9LVC0 Arabinogalactan peptide 141652e-011

TrEMBL top hits (Blast detail)Scoree value
Q2V609 Putative uncharacterized protein1913e-013
A9P890 Predicted protein1449e-008
A9PBQ1 Predicted protein1412e-007
B9GY63 Predicted protein1341e-006
B9IPQ7 Predicted protein1322e-006

Arabidopsis top hits (Blast detail)Scoree value
AT3G13520.1 AGP12 (ARABINOGALACTAN PROTEIN 12)2478e-022
AT1G55330.1 AGP211922e-015
AT4G26320.1 AGP13 (arabinogalactan protein 13)1671e-012
AT5G56540.1 AGP14 (ARABINOGALACTAN PROTEIN 14)1662e-012

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
122  20%
 
64  40%
 
102  20%
 
191  10%
 
211  10%

Unigene MembersMember information