RadishBase

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Information for unigene UN16255

FASTA Sequence

Unigene ID: UN16255	Length: 1254		SNP
AATCAATCCTTCTGGGCTTTATTAAAGTAAAGACACTACAAAACAAGTATCTAAAATTCCATATAGTAGACTGTAGAAAGGACAGT TGGCAGATAAAATTATATTTTTGAAAGACGGGAGAATAGAGAAGCGAAGACAGCAAAAGTAAGCTGAGAGATCACGTGGGGACGGA GAAGGAGGCGTTGGTATATGATTGGACCGACCAGTTTGCACTGTTTCATGTTATCGCCAAACATCAAGACTTGTCCACATGCCGCC AGTGACGAGCTCATTACTTTATGTATAGACGACTCCTCTTCCTATTATTACTTTTATAGCAAAGAAAAGTGTCTAGAATCAAGAAA ATCGGAAGAGGAAAAGAGAGGAAGAACAAGAGTTATGTCATACAACACGGGATCTTCATCATCTTTTGCTAATGTGTTACTCGTCG TGTCACTTATGCTTCTGAGTTTGTCGGCTGATGCGTACAAGAACTATACTGTGGGAGGGTCCACGGGATGGTTCGATATCCAGGAG AAATCGTCTGCAAATTATCAGAAATGGGCTGATTCCAAAACCTTTTCTTTGGGTGATTTCCTCATTTTCAACACAGATAGCAACCA TTCGGTGGTACAAACATATGATTTCAAAACTTACAAAGAATGTGACTACAACAATGGTGAAGACAATAGTACAACAGAGTGGTCGG CTGCAAACCCTTCAGCGACATCTCCAGTTCCGGTCTCAGTTAGTGTTCCTCTAGTTAAAGAAGGTTCCAATTATTTCTTCTCAGGA AATTATGACGGTGAGCAATGTAAATTTGGACAGCATTTCATGATAAATGTAACACATGGTCAGGGCCTACCATCACCAGATGAAGA TGGTGAAACGGCCCCTGGACCAGGTCAATCCTCTCAATCCGGTGATGATGATGAAGTTGCTCCAGATACCATAGTTCCCGCCAATT TTGACCATCCTAAAGATATTGAGAGTGATGATGATGATAGTTTGGTTAAGGGTCGTAAAAGTTCTTCTTCCGTTACAAAATATAAT TTGTTATGTTTAGTTTTAATGGGGTTCCTAGCATCATTCTTTTGATCAAATTATTCTTCTGTGTGTATTATAATCATTGTGTCTTT TGGAGATATCAGTATAATTATCTTAGCTGATAATTATCATAATAATATTTACGAAATTCTATACATAGAATGCGTTTCTGGAGGTG TAATAATAAGTATCCTAGTAAAAGAAATGAAATCAGTATAAGTTTAGCTC

Annotation (GO term)

GenBank top hits (Blast detail)	Score	e value
NP_563820 early nodulin-like protein 18 [Arabidopsis thaliana]	968	2e-102
AAM61545 unknown [Arabidopsis thaliana]	967	3e-102
XP_002889698 hypothetical protein ARALYDRAFT_470911 [Arabidopsis lyrata subsp. lyrata]	965	4e-102
ACU15995 unknown [Glycine max]	702	1e-071
ACU13376 unknown [Glycine max]	680	5e-069

Swiss-Prot top hits	Score	e value
No hits found

TrEMBL top hits (Blast detail)	Score	e value
O82083 Putative uncharacterized protein	968	1e-102
Q8LF88 Putative uncharacterized protein	967	2e-102
C6T2V7 Putative uncharacterized protein	702	9e-072
C6SVV3 Putative uncharacterized protein	683	1e-069
B9SB85 Copper ion binding protein, putative	643	6e-065

Arabidopsis top hits (Blast detail)	Score	e value
AT1G08500.1 plastocyanin-like domain-containing protein	968	7e-105
AT2G25060.1 plastocyanin-like domain-containing protein	116	5e-006
AT3G27200.1 plastocyanin-like domain-containing protein	116	5e-006

EST library breakdown for ESTs in the assembly

Library

ESTs

Percentage of ESTs in assembly


6	5			31%


9	3			19%


7	4			25%


8	2			13%


11	2			13%

Unigene Members	Member information