 |
Information for unigene UN16269
| FASTA Sequence |
| Unigene ID: UN16269 | Length: 1110 |
| SNP | GCATTTCAAGAAGCTATAAACGATTACACTACACCTCCTATGAAAGACCTAACCATGGACTTGACAGGAAAAATAAACGGCTACGT
TTCCTTCTTGATAGAATGTCGTCCACTCTCCATGAGCATGGGAAACGCGATCAGGTTCTTGAAGAACCAACTCAGAAAACTACCTG
TAGACTTATCAGAGGCAGAGGCAAAAGCTTCTCTCTGCTCCGAAATTGGCCGGTTCATAGACGAGAAGATCATTCTTGCAGACAAG
GTGATTGTACAACACGCCGTAACGAAAATCAGAGACGGAGAGGTTCTTCTCACATACGGATTCTCCTGTGTGGTTGAGATGATTCT
CTTGTACGCCCATGAGATTGGGAGAAAGTTCCGTGTAGTGGTTGTAGACTCACGCCCTAACCTTGAAGGTCAAAAGCTACTCCGTA
GGCTTGTCGCCCGTGGTCTCGACTGTACCTACACTCATATAAACGCCGTTTCCTACATCATGGGTGAGGTTACGCGTGTCTTTCTT
GGGGCTTCGTCCATCTTCTCTAATGGAACTCTGTACTCGAAAGTTGGTACGGCGTGTGTTGCAATGGTTGCAAACGCGTTTAGTGT
CCCAGTCATTGTGTGTTGCGAAGCTTACAAGTTCCATGAAAGAGTCCTGCTTGATTCAATCTGCTCTAACGAACTTGGGGATCCTG
ACGCCATAGCCAATGTGCCATTAAGAACCAACACAAAGCATGCAAAGACGATGGATAACAACAAAAACCTCCAGTTTCTGAATCTA
ATGTACGATTCAACTCCTGCTGAGTATATATCTATGATCGTTACGGATTATGGAATGATTCCTCCGACGAGCATACCTGTGATTGT
TCGTGAATACAGGAGAGAAGACTTGTTGCTGTAAAAGGTAATGTTGTTTGGATATCTATAGCACACAGATACAAATACAATTTACG
GAGGGAAGGAAAGCGAGTCTTGAACACAAACTGCTTAAACATAAATAAACATTATTAATACCTCTAATTGTGAGTGTTAAATTTTT
GCATTTTCTTTTTATCAGTTCGACTAATATTTGGGAATCTTCTTATTTCTCGATTAATGTGAAATTTTTGTTTCTATT
|
|
|
| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_175327 putative guanine nucleotide exchange factor eIF-2B delta subunit [Arabidopsis thaliana] | 1401 | 1e-152 |
| XP_002894151 GTP binding protein [Arabidopsis lyrata subsp. lyrata] | 1397 | 3e-152 |
| AAF69705 F27J15.24 [Arabidopsis thaliana] | 1306 | 1e-141 |
| XP_002318562 predicted protein [Populus trichocarpa] | 1158 | 2e-124 |
| XP_002283177 PREDICTED: hypothetical protein [Vitis vinifera] | 1157 | 2e-124 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q54FM3 Translation initiation factor eIF-2B subunit delta | 691 | 9e-072 |
| Q63186 Translation initiation factor eIF-2B subunit delta | 675 | 7e-070 |
| Q61749 Translation initiation factor eIF-2B subunit delta | 674 | 9e-070 |
| Q09924 Probable translation initiation factor eIF-2B subunit delta | 671 | 2e-069 |
| Q9UI10 Translation initiation factor eIF-2B subunit delta | 669 | 3e-069 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9M999 F27J15.24 | 1306 | 7e-142 |
| B9I2P5 Predicted protein | 1158 | 1e-124 |
| A2XK32 Putative uncharacterized protein | 1147 | 2e-123 |
| A3AKT9 Putative uncharacterized protein | 1147 | 2e-123 |
| Q10G37 Translation initiation factor eIF-2B delta subunit, putative, expressed | 1147 | 2e-123 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G48970.1 GTP binding / translation initiation factor | 1402 | 3e-155 |
| AT5G38640.1 eukaryotic translation initiation factor 2B family protein / eIF-2B family protein | 1145 | 2e-125 |
| AT2G44070.1 GTP binding / translation initiation factor | 1112 | 1e-121 |
| AT3G07300.1 eukaryotic translation initiation factor 2B family protein / eIF-2B family protein | 223 | 2e-018 |
| AT3G07300.2 eukaryotic translation initiation factor 2B family protein / eIF-2B family protein | 223 | 2e-018 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
|
|
|
|
