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Information for unigene UN16273

FASTA Sequence
Unigene ID: UN16273Length: 1458  SNP
AACTTAAAAGATTATTTGAAAAGGGCATATAACGATATTTTGTTGTATATCTCAAAACTCAATATCTTGTTTCCCTGTAAGTTTGT
GCCACAAGAAGGTTCAATTATTCAGCACTCTCCAGGGAGAAAGATAACATAAAAAAAAACTCTTTCGTCTCTCTTCGTGACTTGCT
TTGGTTAGATGCATGAAGGTGAATCAGTTCATTCTGCATCGACGCAGACACATCATCCAAAACTCCCAATGTTGTGTGGGGGAATC
TCTACTGTATCTTGAAGATGTTCTTCAGTTTTACAACTAGCTTCCACTCATCCATGTTTAACTCATCCCTGTAGTTAGTTTTGAGT
ATGTCGATAGATTTTCTGGAAATGTGACTCACAAGCTCATCTTCCATGTCAAAATGCCTCCCAAACATCTTCTGCTCTTCAGGGTT
TGAAGCAATAATCTTGATAGCCACCTGGGTGCCTTTCTTTGCATAGTCAACAGGCTTGTGGTTGTTCTCAATAGAGGCAATGCGGC
CAATATCGATAAACTCTCTACTCGGGACGCAGATGGGAGTTCCAATCTTAAGTACACCCTCGACGACGTCAACTCCAAGGACAATT
GGATCTCTCTTATTGAACACACAGTTGGGTAAAATCCTAAGGACACATGGGAAGACTGCTTCATCGGCTGATTCCTTCTTCTTCTC
CTCTTTGATACTCTCGATATACGCCTTGAACTGGTCGAACAAATGGTAGATGATATCAGCGCAGAAGATCTTAACTCCCATCTCGT
CCGCGAGCTCTCGAGCGTCCGTGGTCACTTTCACGTCGAAAGCCAAGATCGTGGCGTATTCCTTCTTCCTCTCGAGCATCACTCCC
GCTTTCATGATGTCTTTCTTGTGCACGGGCCCTATGCCGATACCGCTGACGGGTATCTTTACAGCTGGGGACTTCAAGAACTCGAG
CAAGGCTTCCAGTGACCCTAGCGTAGACGCTTGTACGTAAACTCCTTCGCCGCTTTTGTCGATCCTGCTCTAAACTGACTCCATGT
CTTCCATTGCCTGCTCCTTGATTGCTTCGATGTCATCATCGGGTCCAATCACGTGCAGTGCAGTGCCAGCAATAGCGTGTTCAAGG
CCCTGGGCAGTGATTTTAATACCCTGTGCTGCCTTTATTTCTTTGTGATGCGCATAAGTACCCTTCACCCGTAGCTCCTTCATTGG
ATGAGGAGTCAGTAACGCTCTGATCGTTGTGTCTATAGGTCCCTGTAACCCACACACGACGATCTGATCACCTTCATGAAGCACAC
CGTTTACCAATACAACATCAATCGTTGTACCATGGCCTTCGATAACTTTGACCTCAGGACAGTACACTGCACTTCGTCAACATATG
TAAGCTTCTCAACCATTGTTTTCTGAGCCCAGTTAACCAACAACAGCAAAAGATCTGGGATCCCTTCCCCAGTAATAGCACC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_177807 translation initiation factor eIF-5B [Arabidopsis thaliana]17254e-190
AAF04442 putative translation initiation factor IF-2; 73082-68138 [Arabidopsis thaliana]17254e-190
AAL87276 putative translation initiation factor IF-2 [Arabidopsis thaliana]17102e-188
XP_002889098 hypothetical protein ARALYDRAFT_895554 [Arabidopsis lyrata subsp. lyrata]16483e-181
BAF01273 putative translation initiation factor IF-2 [Arabidopsis thaliana]16287e-179

Swiss-Prot top hits (Blast detail)Scoree value
Q10251 Eukaryotic translation initiation factor 5B10673e-115
Q05D44 Eukaryotic translation initiation factor 5B10252e-110
B2GUV7 Eukaryotic translation initiation factor 5B10252e-110
O60841 Eukaryotic translation initiation factor 5B10217e-110
Q5RDE1 Eukaryotic translation initiation factor 5B10172e-109

TrEMBL top hits (Blast detail)Scoree value
Q9SRD2 Putative translation initiation factor IF-2; 73082-6813817253e-190
Q8RXM9 Putative translation initiation factor IF-2 (Fragment)17102e-188
Q0WNM6 Putative translation initiation factor IF-216285e-179
Q9SRD1 Putative translation initiation factor IF-2; 74568-7897215651e-171
Q8H6S8 Translation initiation factor15604e-171

Arabidopsis top hits (Blast detail)Scoree value
AT1G76810.1 eukaryotic translation initiation factor 2 family protein / eIF-2 family protein17261e-192
AT1G76820.1 GTP binding / GTPase16283e-181
AT1G21160.1 GTP binding / GTPase/ translation initiation factor14105e-156
AT2G27700.1 eukaryotic translation initiation factor 2 family protein / eIF-2 family protein8854e-095
AT2G27700.2 eukaryotic translation initiation factor 2 family protein / eIF-2 family protein8854e-095

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
84  44%
 
113  33%
 
61  11%
 
141  11%

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