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Information for unigene UN16292

FASTA Sequence
Unigene ID: UN16292Length: 1723 SSR 
TTTTTTTCAGATTCTTCTCCAAGAATTGTTTTCATCCTAGAGATCATCATTACAATCTCCACAGACAGGATCTGATTTTGAAAGAG
GGATCTCTCTCTCTCTGCAAAATGGCGAATAACGGGGCGGCTTGTGCTGAGAGGGCTACAAATGATATGCTGATTGGTCCTGATTG
GGCTATCAACATTGAACTCTGTGACATTATCAACTTGGATCCTAGTCAAGCAAAAGAAGCAGTGAAGGTGCTCAAGAAACGGTTAG
CAAGTAAAAACTCCAAAGTTCAGATTCTTGCTCTTTATGCATTGGAAACTCTTAGTAAGAACTGTGGAGAGAGCGTGTTCCAGCTT
ATCGTGGACCGTGGTATCTTGCCTGATATGGTCAAAATAGTGAAGAAAAAGCCAGACCTTAGTGTGAGGGAGAAGATACTTAGTTT
ATTAGATACTTGGCAAGAAGCTTTTGGTGGAAGCGGTGGTAGATTCCCTCAGTATTACAATGCTTATAATGAACTCAGGTCTGCTG
GAGTTGAGTTCCCACCTCGAACCGAGAGCAGTGTCCCCTTCTTTACTCCACCTCAGACTCAGCCCATTACTGCTCAAGCCGTTGCT
GCATCGGATGAAGATGCTGCTATTCAAGCCTCTTTGCAAAGTGATGATGCTTCTGCACTCAGTGTGGAAGAGATTCAAAGTGCTCA
GGGATCAGTTGATATATTGACAGACATGCTTGGGGCTCTTGATCCAAGCCATCCTGAGGGTTTAAAGGAAGAACTTATAGTTGATT
TGGTTGAGCAATGCCGTACTTATCAAAGACGTGTGATGACTCTCGTCAACACTACATCAGATGAGGAGCTTCTGTGTCAAGGATTA
GCATTAAACGACAACCTGCAGCGTGTTCTTCAGCAACATGATGACAAGGCGAAAGGAAACTCTGTTCCTACTGCAACAGCTCCCGC
TCCTATACCGCTTGTTAGCATCAACCATGACGATGATGATGATGAGTCAGATGATGATTTTGCTCAGCTATCTCACAGGTCGAAAA
GAGAGAGTGCACGAGTGAGTTTCAACCCTGTTCTTCCTCCTCCACCGCCACCTACAATGAGGCCGGTACATGTTGAATCTAATGCT
ATGGACTTCCTCAGTGGTGATGTCTACAAACCTCAAGGAACCTCAGAGAGTGTAAAGCCTTCCCATTCATCAGACCTCGACTCTTC
TGCTCCTATTTTCGATGAGCCAATTCCTAGAAGCAAATCCCCTGATGAGCAACCTTTGTTCAGTAAACCAGTTTATGACCAGACTG
AGAAACTGCCTCGTGCTCCATGGGATACTGAAGGAACCAGGGTTGTTCCACCACCAATGTCTGTTAGAACCAAGCATAATAATAAT
GTTCCTCAAAACTCAAGCAGTGGCTCTGATTCCTCTTACGATGATCTCTTGGGGCAATCCAGGAATCTCTCTCTGAATCCAACCGC
GTCTACTGCTACACCACCACCAAAGAAAGATGATAAACCAGAGGATATCCTTTTCAAAGACTTGGTTGACTTTGCAAAAAACAGGA
AATCATCTTCTTCTTCTTCCTCCAAACCCATTTGAGGCAGAGCTTCCTGTTGTTGGCTTTAGTAATAAATACTCTTTTACCATTCT
TTTCTCCTTCACTTCTTCATTTGTGTTCTTTTGATTGATGAACATGGAGGGTTGAACACTCTGTTTCTTTTTCTATCAAATAAAAA
GTT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_564138 Target of Myb protein 1 [Arabidopsis thaliana]20921e-232
XP_002893160 VHS domain-containing protein [Arabidopsis lyrata subsp. lyrata]18618e-206
XP_002307466 predicted protein [Populus trichocarpa]13662e-148
XP_002300956 predicted protein [Populus trichocarpa]12084e-130
XP_002285894 PREDICTED: hypothetical protein [Vitis vinifera]11852e-127

Swiss-Prot top hits (Blast detail)Scoree value
Q5SRX1 TOM1-like protein 22475e-020
Q6ZVM7 TOM1-like protein 22467e-020
Q68FJ8 TOM1-like protein 22351e-018
Q99LI8 Hepatocyte growth factor-regulated tyrosine kinase substrate2181e-016
Q9JJ50 Hepatocyte growth factor-regulated tyrosine kinase substrate2181e-016

TrEMBL top hits (Blast detail)Scoree value
Q9LPL6 F24J8.3 protein20929e-233
B9H7L0 Predicted protein13661e-148
B9GTY0 Predicted protein12083e-130
B9S2Q1 Protein transporter, putative11582e-124
Q2R9B5 Os11g0199700 protein9701e-102

Arabidopsis top hits (Blast detail)Scoree value
AT1G21380.1 VHS domain-containing protein / GAT domain-containing protein20925e-235
AT1G76970.1 VHS domain-containing protein / GAT domain-containing protein13774e-152
AT4G32760.1 protein transporter7923e-084
AT3G08790.1 VHS domain-containing protein / GAT domain-containing protein6938e-073
AT5G01760.1 VHS domain-containing protein / GAT domain-containing protein5692e-058

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
101  8%
 
128  67%
 
211  8%
 
181  8%
 
71  8%

Unigene MembersMember information