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Information for unigene UN16300
| FASTA Sequence |
| Unigene ID: UN16300 | Length: 1364 |
| SNP | GGGAAAACGTAACAAGAAGTCGTAACCAATTGTGGGGGATGGAGAGGAAGGAGCTCTGTCTACACACGCCATCATCAACGACTAGC
TCTTTTTGATTCCTCCGTTGTCGTCGTCGTTACGATTTCAATTTGAAGCGGGCGGGGAGGGTAAAGGATGTCGGACGCTCTGATAA
ATGGATTGGCGGGAGCTGGGGGCGGGATCATTGCTCAACTCCTCACTTATCCTCTCCAAACTGTGAATACGCGCCAACAGACGGAG
CGGGATCTCAAGAGGGAGAGGAAGAAACTTGGCACTTTCCAACACATGTGCCAGGTTGTGAAACAAGAAGGATGGGGGCGACTGTA
TGGTGGATTGGCTCCGTCTCTAGTTGGAACCGCTGCGTCACAGGGTGTGTACTATTACTTCTACCAAGTGTTTCGGAACCAAGTTG
AAGCTGCTGCTCTTCGACAAAAGAAGAAAGGGTTGGGTGACGGATCTGTTGGCATGTTTTCTTCTCTCCTTGTTGCTGCCTTAGCT
GGATCAGTTAATGTTCTTATGACGAATCCAATTTGGGTGATTGTTACACGCATGCAGACCCACAAAAAAATACCAAAAGGTCTGCA
GACTGTCCCCGAGCCACCTTCTGCTGATGTAGAAGCTCTTGTTCCAGTTGAGCCTCGTCCATACGGAACCTTTAACACGATTCAAG
AGATTTACGATGAAGCTGGAGTGACTGGCTTCTGGAAAGGTGTAATTCCGACATTGATCATGGTTTGTAATCCAGCAATGCAATTT
ATGTTATACGAGACAATGTTATCAAAGCTGAAGAAAAAACGTGCGCTCAAGGGTAGCACCAACGTGACGGCTTTGGAGACATTTCT
TCTTGGAGCTGTGGCTAAACTCGGAGCTACAGTCACAACTTATCCTCTCTTGGTTGTAAAGTCACGACTTCAAGCCAAACAGGTCA
CCACAGGGGACAAAAGACAATATTACAAAGGAACGCTGGATGCGATTCTGAAGATGATACAATACGAAGGGCTGCACGGGTTCTAC
AAAGGGATGAGCACGAAGATTGTTCAGAGCGTTTTCGCTGCTGCTGTTCTGTTCATGATCAAGGAAGAGCTTGTCAAGGGTGCTAA
GCTTTTGCTCTCCAACGCCACTTCTAGCAATGTCAAGTCCAAGCCTTCTTGAAGCTCAATCCAACTAGGATTTTGGAAATAAGATT
GAAAAAAGAGAGGTTAAATTGAACTTCCAATAGTTTCTTGATTAGTTATCACACACTATTGGAATGCCATGTTCATGATTATTACA
ATTAAGTATTGTATTTCTGCAAGAGTATTGTGATTTTTATCATTTTATTTTTATTCTTGGCCGCTGATTTCTCT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_181526 solute carrier family 25 member 17 [Arabidopsis thaliana] | 1498 | 8e-164 |
| AAM65850 putative peroxisomal membrane carrier protein [Arabidopsis thaliana] | 1494 | 2e-163 |
| XP_002881687 peroxisomal membrane protein [Arabidopsis lyrata subsp. lyrata] | 1494 | 2e-163 |
| XP_002315175 predicted protein [Populus trichocarpa] | 1273 | 9e-138 |
| XP_002526854 peroxisomal membrane protein pmp34, putative [Ricinus communis] | 1244 | 2e-134 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q76P23 Mitochondrial substrate carrier family protein Q | 306 | 5e-027 |
| Q9H2D1 Mitochondrial folate transporter/carrier | 222 | 3e-017 |
| Q95J75 Mitochondrial folate transporter/carrier | 222 | 3e-017 |
| Q86I81 Mitochondrial substrate carrier family protein I | 182 | 1e-012 |
| P21245 Peroxisomal membrane protein PMP47A | 158 | 8e-010 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| O04200 36kDa-peroxisomal membrane protein (PMP36) | 1498 | 5e-164 |
| Q8L9P5 Putative peroxisomal membrane carrier protein | 1494 | 2e-163 |
| B9HT05 Predicted protein | 1273 | 6e-138 |
| B9SLI5 Peroxisomal membrane protein pmp34, putative | 1244 | 1e-134 |
| B9HHL2 Predicted protein | 1208 | 2e-130 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT2G39970.1 peroxisomal membrane protein (PMP36) | 1498 | 3e-166 |
| AT5G66380.1 ATFOLT1 (ARABIDOPSIS THALIANA FOLATE TRANSPORTER 1); binding / folic acid transporter | 224 | 2e-018 |
| AT3G05290.1 PNC1 (PEROXISOMAL ADENINE NUCLEOTIDE CARRIER 1); ADP transmembrane transporter/ ATP transmembrane transporter/ binding | 183 | 9e-014 |
| AT5G27520.1 PNC2 (PEROXISOMAL ADENINE NUCLEOTIDE CARRIER 2); ADP transmembrane transporter/ ATP transmembrane transporter/ binding | 176 | 6e-013 |
| AT4G26180.1 mitochondrial substrate carrier family protein | 143 | 4e-009 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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