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Information for unigene UN16301

FASTA Sequence
Unigene ID: UN16301Length: 827  SNP
TTTTTTTTTCCGAAACCTTAGTGATAATTTCACTAGCAAAAAAGAGCGAGGAGAGTACTGGATACATTGTTGTACTACTAAAGAGA
GAGACAAAACAGCAGATGTTATTGAATTGATTGTTTGCTGTTCTAAGGTACAAGTATCACAATCTTCTAGTCAACAGAAGATGTTA
TCTGACAAAAGACACCTTTAGATTGTTGAACCAATCTCTTTTCAGGACGACGAAGCTGTCTCCACCGTAGTGGACTTGGCCATTGC
CGCTTTAGTGTAGATAGGGTGAAGAACATGACCTCCCTTAGGATCAACATGAATCCATTTGCGTCCAGTGATCTTGTTTTTCTCGA
ACCTGACTCGTCCTTCCTTCAATGCAAACAGAGTATGGTCCTTCCCAATCCCGACATAGTCTCCCGGATGAAAACGAGTTCCACGT
TGACGGACTATTATGTTTCCCGGTATCACATTCTCTCCTCCGAACTTCTTGACGCCGAGATTCTTGGGCTTAGAGTCACGTCCGTT
CTTGGTGGAACCGGCGGTTTTCTTAGTAGCCCAACGCTTTAACACCAAACTCAACCCACTTGAAGAACAATCGGAGATGCCACTGC
CACCGTAAGCAGGAACCTCGGTGATAAGTTCCCTCAAACTAACTCTTCTGCATAAGGATGCTGCTGAGTTTAAGAAATTCATTTTG
TGCAGAAATCAGAAATTTTCGATTCCAGGACACTGCGACCGGTGATAAATGTGATCGGAGGCGACGGCGTGTAGAGGGAAAGGGCT
CAACTCCAGAAAGGGAAAACCTTATTCGCAAGTGTGAAAACTATACCCACCCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_565398 Ribosomal protein L27 family protein [Arabidopsis thaliana]7242e-074
XP_002873715 ribosomal protein L27 family protein [Arabidopsis lyrata subsp. lyrata]7233e-074
NP_568310 large subunit ribosomal protein L27 [Arabidopsis thaliana]7214e-074
CAB89332 ribosomal protein L27-like [Arabidopsis thaliana]7072e-072
ACJ83890 unknown [Medicago truncatula]5673e-056

Swiss-Prot top hits (Blast detail)Scoree value
A9IM57 50S ribosomal protein L272883e-025
B4RZH4 50S ribosomal protein L272874e-025
B6EL42 50S ribosomal protein L272857e-025
A7N0G1 50S ribosomal protein L272822e-024
Q87SU3 50S ribosomal protein L272822e-024

TrEMBL top hits (Blast detail)Scoree value
Q9ZVX0 50S ribosomal protein L277241e-074
Q94AC6 AT5g15220/F8M21_1107213e-074
Q9LXF9 Ribosomal protein L27-like7071e-072
B7FGL1 Putative uncharacterized protein5672e-056
C6TCI4 Putative uncharacterized protein5611e-055

Arabidopsis top hits (Blast detail)Scoree value
AT2G16930.2 ribosomal protein L27 family protein7248e-077
AT2G16930.1 ribosomal protein L27 family protein7248e-077
AT2G16930.3 ribosomal protein L27 family protein7248e-077
AT5G15220.1 ribosomal protein L27 family protein7212e-076
AT5G40950.1 RPL27 (RIBOSOMAL PROTEIN LARGE SUBUNIT 27); structural constituent of ribosome2292e-019

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
66  50%
 
72  17%
 
92  17%
 
121  8%
 
101  8%

Unigene MembersMember information