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Information for unigene UN16303
| FASTA Sequence |
| Unigene ID: UN16303 | Length: 853 |
| SNP | GGACTCCATTATTAATCAATTAGCTCATTACAGAGAAACGACCAAACAGAAAGAAAAAAAAACATGGCAACTCAAGCGTCCGGACT
CTTTAGCTCCGCCATAACAACCACAGCAACCTCCGGTGTGAAAAAACTCCACTTTTTCACAACATCCGCCCGTCCAAGATCCCTCT
CCCTCACCAAAACCGCAATCCGCGCCGAGAAAACAGATTCCGCCGCCGCCGCCCCAGCCCCCGCCGTGAAAGAAGCTCCGGTGGGA
TTCACGCCGCCTCAGCTAGACCCAAACACACCGTCACCGATCTTCGCGGGAAGCACCGGTGGGCTTCTCCGCAAAGCCCAGGTGGA
AGAGTTCTACGTTATTACATGGAACTCGCCGAAAGAGCAGATCTTTGAGATGCCGACGGGAGGTGCGGCGATCATGAGGGAAGGTC
CGAACTTGCTGAAGCTGGCGAGGAAAGAACAGTGCTTGGCTTTGGGGACAAGGCTTAGGTCCAAGTACAAGATTAACTACCAGTTT
TACAGGGTGTTCCCTAATGGTGAGGTTCAGTATCTTCATCCTAAAGATGGAGTTTACCCGGAGAAGGCGAATCCGGGAAGAGAAGG
TGTTGGTCAGAATATGAGATCTATTGGGAAAAATGTTAGTCCCATTGAAGTTAAGTTTACTGGGAAACAAAGTTATGATTTGTAAG
TTGTGAAAATTTAAAATGTGATAAAAAAAAACAAAAAATCATGTGGATGTGACTATGTTTGGTTTTAATTTTTAATGGGGTTCCAT
TTGAATAATTATTCTCGTATTATATTTTGTTGTTGTTGTTATATGAATTTTGTTGTGGTCATTTTCAGTCAGTTAATTT
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| GenBank top hits (Blast detail) | Score | e value |
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| NP_192186 photosystem I reaction center subunit II-1 [Arabidopsis thaliana] | 997 | 5e-106 |
| AAM66066 putative photosystem I reaction center subunit II precursor [Arabidopsis thaliana] | 994 | 1e-105 |
| XP_002872810 hypothetical protein ARALYDRAFT_490280 [Arabidopsis lyrata subsp. lyrata] | 989 | 4e-105 |
| NP_171812 photosystem I reaction center subunit II-2 [Arabidopsis thaliana] | 947 | 3e-100 |
| XP_002892148 hypothetical protein ARALYDRAFT_887465 [Arabidopsis lyrata subsp. lyrata] | 936 | 5e-099 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9S7H1 Photosystem I reaction center subunit II-1, chloroplastic | 997 | 2e-107 |
| Q9SA56 Photosystem I reaction center subunit II-2, chloroplastic | 947 | 1e-101 |
| P12353 Photosystem I reaction center subunit II, chloroplastic | 776 | 9e-082 |
| P12372 Photosystem I reaction center subunit II, chloroplastic | 763 | 3e-080 |
| P32869 Photosystem I reaction center subunit II, chloroplastic | 756 | 2e-079 |
| TrEMBL top hits (Blast detail) | Score | e value |
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| A8C1B5 PSI reaction center subunit II | 801 | 2e-083 |
| A8C183 PSI reaction center subunit II | 798 | 4e-083 |
| B9RSQ3 Photosystem I reaction center subunit II, chloroplast, putative | 777 | 1e-080 |
| A9PGC7 Putative uncharacterized protein | 775 | 2e-080 |
| A9PJR8 Putative uncharacterized protein | 772 | 4e-080 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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