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Information for unigene UN16326
| FASTA Sequence |
| Unigene ID: UN16326 | Length: 1002 |
SSR | | GGAACGCAGAACAACTTTTGTGGAGGAGAGAAAGCGATATAACACACACAGAGATATACATCTTCAATAGTTAAGAGTTTTCTATA
TACAGAAGAAGTGTGTGTGTGTGAGAGAGAGACATCAGTTACAAAAGCAAAAGAAATGCAACAGCACCTGATGCAGATGCAGCCCA
TGATGGCTGGTTACTACCCCAGCAATGTCACCTCTGATCATATTCAGCAGTACTTGGACGAGAACAAATCGTTGATTCTGAAGATA
GTTGAATCTCAAAACTCGGGAAAGCTCAGCGAGTGTGCCGAGAACCAGGCAAGGCTTCAACGCAACTTAATGTACTTAGCTGCAAT
TGCAGATTCTCAGCCTCAACCTCCAAGCATGCATAGCCAGTATGGATCTGGTGGTGGTGGGTTGGTTCAGGGAGAAGGAGGGTCAC
ACTATTTGCAGCAGCAACAGGCAACTCAACATCAGCAGCAGATGACTCAACAGTCTCTAATGGCGGCTCGTACTTCTTCAATGATG
TATGCTCAGCAGCAGCAGCAACAGCCTTATGCAACACTTCAGCATCAGCAATTGCACCATAGCCAGCTAGGGATGAGCTCAACTAG
CGGAGGAGGAAGCAGCGGTATACATATCCTTCAGGGAGAGGCTGGTGGGTTTCATGAGTTTGGTCGTGGGAAGTTGGAAATGGGAA
GTGGTGAAGGCAGAGGAGGAAGCTCAGGAGATGGTGGAGAAACCCTTTACTTGAAATCATCAGATGATGGGAATTGAAAAGAGTGT
GTCACAAGGAATCAAAATGATGAAGTTAGTAACAGTAAGAGTTGAAGTTATTGTGTTTTGTTTAAGTTGCTTGTTGAAGAAGAAAA
GTACTCTTATTTACATGTTTGTGTTTTTTTGTTGTATTTTCTTTATGTTTGTTCCCTAAAAAAGTGAACTCTTTCGTGGTAGTGTA
CCATGTAAATCTGCTCGCTCTATGTTGTGTCGTATAATCTTAGTATGTTATTTCCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002874431 hypothetical protein ARALYDRAFT_910943 [Arabidopsis lyrata subsp. lyrata] | 983 | 3e-104 |
| NP_198216 transcriptional coactivator-like protein [Arabidopsis thaliana] | 971 | 6e-103 |
| XP_002521950 synovial sarcoma associated ss18 protein, putative [Ricinus communis] | 650 | 1e-065 |
| ABK22130 unknown [Picea sitchensis] | 489 | 5e-047 |
| XP_002262678 PREDICTED: hypothetical protein [Vitis vinifera] | 481 | 4e-046 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q08E31 Calcium-responsive transactivator | 155 | 1e-009 |
| Q15532 Protein SSXT | 151 | 3e-009 |
| Q5RFQ1 Protein SSXT | 151 | 3e-009 |
| Q91XJ0 Calcium-responsive transcription coactivator | 149 | 6e-009 |
| Q8BW22 Calcium-responsive transactivator | 148 | 7e-009 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q8L8A5 GRF1-interacting factor 1 | 971 | 4e-103 |
| B9S7I1 Synovial sarcoma associated ss18 protein, putative | 650 | 7e-066 |
| A9NNB9 Putative uncharacterized protein | 489 | 3e-047 |
| B9N9U1 Predicted protein | 475 | 1e-045 |
| C6TGJ5 Putative uncharacterized protein | 462 | 5e-044 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G28640.1 AN3 (ANGUSTIFOLIA 3); protein binding / transcription coactivator | 972 | 2e-105 |
| AT4G00850.1 GIF3 (GRF1-INTERACTING FACTOR 3); protein binding / transcription coactivator | 260 | 7e-023 |
| AT1G01160.1 SSXT protein-related / transcription co-activator-related | 251 | 8e-022 |
| AT1G01160.2 SSXT protein-related / transcription co-activator-related | 207 | 1e-016 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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