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Information for unigene UN16346
| FASTA Sequence |
| Unigene ID: UN16346 | Length: 1102 |
| SNP | GGGCTCACGCTTACACTTATCGCTTGACTCCAAACTCTCAAAACAAAAACTCTCGAAAATGGCGGAACGTGGCGGAGAACAACGTG
GAGCCGTCGGAGAACGTGGTGGTTTCGGACGTGGATTCGGAGGAGGTCGTGGCGACCGTGGTGGTCGCGGTGGTCCAAGAGGATGC
GGAGGCAGACGCGGAGGACGTCCCGCTGAGGAGGATAAGTGGACGCCAGTGACCAAGCTCGGCCGTCTCGTGAAAGACGGAAAAAT
CCAGAAGCTCGAGCAGATCTATCTCCACTCGCTCCCCGTCAAGGAGTACCAGATCATCGACCTCCTCGTCGGTCCCACCTTGAAAG
ACGAGGTGATGAAGATCATGCCGGTTCAGAAACAGACCAGAGCCGGTCAGAGGACGAGGTTCAAGGCCTTTGTCGTTGTCGGAGAC
ACGAACGGGCATGTCGGTTTGGGAGTGAAATGCTCCAAGGAGGTTGCCACGGCGATCAGAGGAGGGATCATACTGGCGAAGCTGTC
TGTGATTCCGGTGAGGAGAGGTTACTGGGGGAACAAGATTGGGAAGCCTCATACGGTTCCTTGTAAGGTTACGGGGGAAGTGTGGT
TCAGTTACGGTGAGGATGGTGCCTGCTCCGAGAGGTGCGGGGATTGTGGCGGCTAGGGTTCCTAAGAAGGTTCTTCAGTTCGCTGG
GATTGATGACGTGTTCACTTCCTCCAGGGGGTCCACTAAAACCCTTGGAAACTTCGTAAAGGCTACATTTGATTGCCTTCAGAAGA
CATATGGATTCCTGACACCAGAGTTCTGGAAAGAGACGAGCTTTAAAAAATCACCGTACCAGGAGTACACTGATTTGCTGGCCTCA
AAGGGAACTACGACCAAAGTCATCACCGAGGTCGAAGACCAAGCCGCCGCCTAAATCATCACCAATATTTTGAATTTTCCTTGATT
TTGATTTTGGTCGAACTCTGTTGGATTGCATCTTTATGTTTTACTCTCTTCCCAAACCATTACTTTTCAGTTTTATAGATGGATAA
TATTCTATCTTTTTGTTTCATTTCAAAACCATTTTATTTTGATTGTTCTTCTACCGAGTTTTAACATAGT
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| GenBank top hits (Blast detail) | Score | e value |
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| XP_002881803 40S ribosomal protein S2 [Arabidopsis lyrata subsp. lyrata] | 794 | 2e-082 |
| NP_181715 40S ribosomal protein S2-3 [Arabidopsis thaliana] | 775 | 4e-080 |
| NP_564737 40S ribosomal protein S2-2 [Arabidopsis thaliana] | 769 | 2e-079 |
| NP_176134 40S ribosomal protein S2-1 [Arabidopsis thaliana] | 769 | 2e-079 |
| AAF82250 Identical to gene XW6 from Arabidopsis thaliana gb|AB008016 and contains a Ribosomal protein S5 PF|00333 domain. ESTs gb|T22200, gb|N38541, gb|T45263 come from this gene. This gene is cut off | 769 | 2e-079 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| P49688 40S ribosomal protein S2-3 | 775 | 2e-081 |
| Q8L8Y0 40S ribosomal protein S2-1 | 769 | 8e-081 |
| Q93VB8 40S ribosomal protein S2-2 | 769 | 8e-081 |
| Q9SCM3 40S ribosomal protein S2-4 | 748 | 2e-078 |
| P15880 40S ribosomal protein S2 | 652 | 3e-067 |
| TrEMBL top hits (Blast detail) | Score | e value |
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| B5BRD8 40S ribosomal protein S2 | 769 | 1e-079 |
| Q8LDY5 40S ribosomal protein S2 | 768 | 2e-079 |
| B9II72 Predicted protein | 730 | 4e-075 |
| A5BIQ8 Putative uncharacterized protein | 729 | 6e-075 |
| A9PDI4 Predicted protein | 728 | 8e-075 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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