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Information for unigene UN16347
| FASTA Sequence |
| Unigene ID: UN16347 | Length: 1149 |
SSR | | AAAAACGCCTTTTCAATTTCCGTCTCTCTGTTTCCACGATTTACGCCCCCTCCCTCGACCGTACCAAATTGATCGTAGATAGGAGC
TCTGAGAAAACGATTTGCTGAGAGATAAGAGAGAGATGAGTTTTCAAGATTTAGAAGCTGGAAGAGGAAGATCGAGGAAGACCAAT
GGTGGTGGTGGTGGTCGGCAAGATTCGACGCAAGCCGTGGCTTCGGGAATATTCCAGATCAATACCGGAGTTTCCACGTTTCAGCG
TCTCGTCAACACGCTCGGTACTCCCAGAGACACGCCTGAGCTCCGTGATAAGCTGCACAAGACACGGTTGCATATAGGGCAGCTTG
TGAAGGACACGTCAGCTAAACTTAAAGAAGCTAGTGAAACTGATCATCAAACTGGTGTCAATCCAAGTAAGAAGATTGCAGATGCT
AAGCTTGCAAAGGACTTTCAAGCTGTGTTGAAAGAGTTTCAGAAAGCTCAACAAACTGCTGCTGAAAGAGAAACTGCTTATGCTCC
TTTGGTGCCTCCTTCTGCTCATCCCTCTAGCTATTCAGCGGGTGGAGTAGATAATATCTCGGAACAGCGGGCGCAAGTTATGGAGT
CGAAAAGGCAGGAGCTTGTGTTGTTAGACAACGAGATTGCATTCAACGAGGCAGTGATCGAAGCAAGAGAGCAAGGGATACAAGAA
ATCCACAGTCAGATTGGCGAGGTTAACGAGATATTCAAAGATCTCGCGGTTCTGGTTAACGATCAAGGAGTCATGATAGATGATAT
CGGTACTCACATTGACAACTCTCGAGCTGCAACTTCACAAGGAAGGTCTCAGCTCGCTCAGGCCGCAAAAACACAAATATCAAACT
CATTTCTGACATGCTTGCTCTTGGTGATATTTGGCATCGTACTCCTGATCGTGATAATCGTACTCGCAGCTTGATTTTTGGAAACC
AAGAACAAGTGGGTTTGAATGTGTTCATGGATCTCAAAGCATCAATGAGTGAATTACTTGGTATATATTACGTAATTTGGATTCAA
AACTTAGAAGTTGGGTTTTGTATTGGTTTGGTTTGTTACGGTTGTAATATAGTGCGTGCGTGCGTGGTTTTGTTGTGCAAACTGTG
TTGGAGATGAGTGAAAGAATGTCTGTTCTGT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_568671 syntaxin-22 [Arabidopsis thaliana] | 1164 | 3e-125 |
| XP_002863386 hypothetical protein ARALYDRAFT_494291 [Arabidopsis lyrata subsp. lyrata] | 1163 | 4e-125 |
| D71447 probable syntaxin - Arabidopsis thaliana | 1005 | 9e-107 |
| XP_002326741 predicted protein [Populus trichocarpa] | 1001 | 3e-106 |
| ACU18736 unknown [Glycine max] | 991 | 4e-105 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9MU58 Predicted protein | 1001 | 2e-106 |
| B9SNS6 Syntaxin, plant, putative | 991 | 3e-105 |
| C6TA84 Putative uncharacterized protein | 991 | 3e-105 |
| Q3HRZ4 Syntaxin-like protein | 990 | 3e-105 |
| A5BYQ4 Putative uncharacterized protein | 987 | 7e-105 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G46860.1 VAM3; SNAP receptor | 1174 | 9e-129 |
| AT4G17730.2 SYP23 (SYNTAXIN OF PLANTS 23); SNAP receptor | 912 | 2e-098 |
| AT4G17730.1 SYP23 (SYNTAXIN OF PLANTS 23); SNAP receptor | 909 | 5e-098 |
| AT5G16830.1 SYP21 (SYNTAXIN OF PLANTS 21); SNAP receptor | 785 | 1e-083 |
| AT1G32270.1 ATSYP24; SNAP receptor/ protein binding | 540 | 3e-055 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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