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Information for unigene UN16357

FASTA Sequence
Unigene ID: UN16357Length: 1299 SSR 
GGAATTTGGACTCGTGGAGCCCTGAGCAGCTCAGGACAATGATGTTTGGTGGGAACAACCGTGCACACGTGTTCTTCAAGCAGCAT
GGATGGACAGATGGTGGCAAAATCGAGGCTAAGTACACTTCGAGAGCTGCTGATTTGTATCCCAGATTCTTGCTAAAGAAGTTGCT
AAAGCCATTGCTGAAGATCTGCCTTCTTCTCCCCTTGCTGCGGAAGGATCTAATGGAGTTGTTTCTTCTTTTTCTGTCAAGGAAGA
GTTGCCATCTCCTGTGAAACATGAAGCTGCTTCTTCGCCTAAAGCTTCTAACACCACGGTCGTGCCTAGTACCTTTAAGAAACCTA
TCGGTGCTAAAAGGACGGGCAAAACCGGCGGTCTTGGTGCACGGAAGCTTACTACTAAGTCTACGGCGAATTTATATGAGCAGAAA
CCAGAAGAAGTTGCACCGGTGATTCCTGCTGCTGCAACTTCAACCAATAACGGTGGAAGCAAATCATCAGGTGGTGGCTCATCATC
ATATGCCTCTCGGTTTGAGTACAATGACGACTTTCAAGCCGGAGGAGGTAAAAGCATTGGTGGTGGTACACAAGTGCTTAACCATG
TTGCCCCACCAAAGTCGTCGAGCTTCTTTTCGGATTTTGGAATGGACTCTTCTGTCCCCAGGAAATCAAGCTCCAACTCCTCTAAA
GCTCAGGTTGAAGAATCAGATGAAGCAAGAAAGAAGTTCACAAACGCAAAGTCCATTTCTTCTGCTCAGTACTTTGGTGATCAGAA
CAAGAATGCTGATCTTGAATCTAAAGCTACTCTTCAGAAGTTTTCAGGCTCAGCATCTATCTCAAGCGCTGATTTTTTCGGTCATG
GCCAAGACGAGTTCAACGACGATTTAACTGCTAGTGATCTCATTAACCGACTTTCTTTCCAGGCACAACAAGATATATCGTCGATA
GTGAACATAGCAGGCGAGACGAAGAAGAAGCTGGGAACATTGGCCTCTGGTATCTTCAGTGATCTTCAGGACAGGATGCTGTAAGA
AGGAGAAGAAGAAGAAGAAGAAGAGGTCTCGCATGTTTTTTTTTCATTTTACAGAGAAGAAGAGAAAGAAGTGTCAGTCGGGAAAC
TTCCAATGAAGGATACTGGTTTCTATGTTTCTAGAGAGCTTTTTTTTGGAACTGAGACGTGGCTTTTGTTGTTATATCAAAACTAT
ATGGATATTATTATTGGATTCTCTGTTTGTTTGCAGATAAAAAATGTGGACAAGAATCAATTTTAATTGTTAAGATACAATCTGTT
TTGAATGTC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_567543 putative ADP-ribosylation factor GTPase-activating protein AGD8 [Arabidopsis thaliana]11294e-121
CAA17132 putative protein [Arabidopsis thaliana]11294e-121
XP_002870079 hypothetical protein ARALYDRAFT_329738 [Arabidopsis lyrata subsp. lyrata]11286e-121
BAD43015 unknown protein [Arabidopsis thaliana]11251e-120
AAK25887 unknown protein [Arabidopsis thaliana]11251e-120

Swiss-Prot top hits (Blast detail)Scoree value
Q8H100 Probable ADP-ribosylation factor GTPase-activating protein AGD811292e-122
Q9FIQ0 Probable ADP-ribosylation factor GTPase-activating protein AGD98953e-095
O82171 ADP-ribosylation factor GTPase-activating protein AGD106336e-065
Q4R4C9 ADP-ribosylation factor GTPase-activating protein 31613e-010
Q5R787 ADP-ribosylation factor GTPase-activating protein 31613e-010

TrEMBL top hits (Blast detail)Scoree value
B9DG60 AT4G17890 protein9691e-102
B9N2M5 Predicted protein7952e-082
B9MU26 Predicted protein7852e-081
B9SNV8 Arf gtpase-activating protein, putative7852e-081
B6TII3 ADP-ribosylation factor GTPase-activating protein 36795e-069

Arabidopsis top hits (Blast detail)Scoree value
AT4G17890.1 AGD8 (ARF-GAP DOMAIN 8); ARF GTPase activator/ DNA binding / zinc ion binding11301e-123
AT4G17890.2 AGD8 (ARF-GAP DOMAIN 8); ARF GTPase activator/ DNA binding / zinc ion binding9696e-105
AT5G46750.1 AGD9 (ARF-GAP DOMAIN 9); ARF GTPase activator/ DNA binding / zinc ion binding8962e-096
AT2G35210.1 RPA (ROOT AND POLLEN ARFGAP); ARF GTPase activator/ DNA binding / zinc ion binding6335e-066
AT2G35210.2 RPA (ROOT AND POLLEN ARFGAP); ARF GTPase activator/ DNA binding / zinc ion binding2626e-023

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
64  50%
 
102  25%
 
92  25%

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