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Information for unigene UN16366
| FASTA Sequence |
| Unigene ID: UN16366 | Length: 2031 |
SSR | | GATTGTAAGAGACCATGACGGGAAGCTCTTGCTGTTGTCTAAAGGAGCTGACAATGTAATGTTTGAAAGACTAGCGAAGAACGGTC
GTCAGTTCGAGGCCAAGACCCAAGAACATGTAAACCAATATGCAGATGCAGGTCTAAGAACTTTGATACTTGCATACCGTGAGGTC
GATGAGAATGACTACATAGAGTTCAACAAGAGTTTCAATGAAGCTAAGGCTTCGGTGAGTGAGGACCGTGAAACTTTAATAGATGA
AATCACGGATAAGATGGAACGTGACCTCATTCTTCTTGGTGCTACTGCTGTTGAGGACAAACTTCAGAATGGGGTTCCCGAATGTA
TTGACAAACTTGCTCAAGCTGGAATCAAGATCTGGGTTCTAACTGGAGATAAAATGGAGACAGCTATCAATATTGGATTTGCTTCT
AGTTTACTAAGACAAGAGATGAAACAGATCATCATCAATCTTGAGACACCACATATCAAATCCCTGGAGAAATCTGGAATCAAGGA
CGAGATTGAATGGCATCAAGAGAAAGCGTTGTGAAGCAAATAGAAGAAGGAAAGGCCTTGCTTGCTGCATCAGGTGCAAGCTCTGA
AGCATTTGTCTTGATCATAGACGGGAAGTCCCTAACCTACGCCCTAGAGGACGAAGTCAAGAACACGTTTCTTAATCTTGCTACTG
GCTGTGCCTCTGTGATATGCTGCAGATCATCACCTAAACAAAAAGCATTGGTTACACGACTGGTTAAGACCGGAACTGGAAAAACA
ACATTAGCGATTGGAGATGGAGCAAATGATGTAGGAATGCTACAAGAAGCTGACATTGGTGTAGGAATAAGTGGTGTAGAAGGAAT
GCAAGCAGTGATGTCTAGCGATATCGCCATTGCTCAATTCAGATATCTAGAACGTTTATTACTAGTCCATGGTCATTGGTGTTACA
GCAGAATCTCATCCATTATATGTTACTTCTTCTACAAGAATATAACTTTCGGTGTCACGGTGTTCTTATATGAAGCTTACGCTTCC
TTCTCTGCACAACCTGCATACAACGACTGGTTTCTCTCTCTTTTCAACGTATTTTTCTCTTCTCTCCCTGTCATTGCACTCGGAGT
CTTTGATCAAGACGTCTCAGCTCGCTTCTGTTACAAGTTCCCGTTGCTATACCAAGAAGGTGTGCAAAATATTCTCTTCAGCTGGA
AAAGGATCATAGGATGGATGTTCAATGGATTCATAAGTGCCCTAGTCATTTTCTTCATCTGCAAGGAATCTCTAAAACACCAGCTA
TTCGACCCAAACGGCAAAACCGCAGGCAGGGAAATCCTAGGGGGATTAATGTACACTTGCGTTGTGTGGGTGGTCAATCTCCAAAT
GGCTTTATCGATAAGTTACTTCACATGGGTCCAACACATAGTGATTTGGGGATCAATTGCCTTTTGGTACATCTTCCTCATGATCT
ATGGAGCTATAACCCCAAGTTTCTCTACCGATGCTTACATGGTCTTCCTTGAAGCCCTGGCTCCTGCTCCTTCCTACTGGCTCACC
ACTCTCTTTGTGATGATATTTGCTTTGACACCTTACTTCGTCTACAAGTCAGTGCAGATGAGGTTTTTCCCTAAATACCATCAAAT
GATTCAGTGGATTAGGTACGAGGGTCACTCTAATGATCCTGAGTTCGTTGAGATGGTGAGGCAGAGGTCGATTAGACCCACCACCG
TTGGATACACGGCGAGAAGAGCTGCCAGTGTACGGCGCTCCGGTAGGTTTCACGATCAGCTCCATAAGGATCTTGTTGCTTTCTGA
AGAGTATAGTAGTGATTGGATGTAAATATATATATATGTACATCTCTAATGTAGAAACTAGGGCTTCTTTTATTAAGATTCCTTGT
CAGAGAAGGCATCTGTAGTTCATTTCACACACGGAAATATTTGTACATAAACTTTTCATCTCTAGTGTAGAGATCAATGTTTTTGT
CTGATTGTATTTATCCTTCATTGAATAATATTGTATAATAACTTCAGACGTGG
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002876920 hypothetical protein ARALYDRAFT_322706 [Arabidopsis lyrata subsp. lyrata] | 2121 | 7e-236 |
| NP_189189 phospholipid-transporting ATPase 10 [Arabidopsis thaliana] | 2114 | 5e-235 |
| NP_172780 phospholipid-translocating ATPase [Arabidopsis thaliana] | 2042 | 1e-226 |
| XP_002892733 hypothetical protein ARALYDRAFT_471476 [Arabidopsis lyrata subsp. lyrata] | 2040 | 2e-226 |
| XP_002888677 hypothetical protein ARALYDRAFT_475997 [Arabidopsis lyrata subsp. lyrata] | 1690 | 7e-186 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9LI83 Phospholipid-transporting ATPase 10 | 2114 | 2e-236 |
| Q9SAF5 Putative phospholipid-transporting ATPase 11 | 2042 | 4e-228 |
| Q9SX33 Putative phospholipid-transporting ATPase 9 | 1655 | 3e-183 |
| P57792 Putative phospholipid-transporting ATPase 12 | 1584 | 6e-175 |
| Q9LK90 Putative phospholipid-transporting ATPase 8 | 1332 | 9e-146 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9I2N3 Aminophospholipid ATPase (Fragment) | 1674 | 3e-184 |
| B9RLA0 Phospholipid-transporting ATPase, putative | 1630 | 4e-179 |
| B9RE61 Phospholipid-transporting ATPase, putative | 1611 | 7e-177 |
| Q0WM60 Calcium-transporting ATPase like protein (Fragment) | 1551 | 6e-170 |
| C5Z2E3 Putative uncharacterized protein Sb10g014640 | 1484 | 4e-162 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G25610.1 haloacid dehalogenase-like hydrolase family protein | 2114 | 2e-237 |
| AT1G13210.1 ACA.l (autoinhibited Ca2+/ATPase II); ATPase, coupled to transmembrane movement of ions, phosphorylative mechanism / calmodulin binding | 2043 | 3e-229 |
| AT1G68710.1 haloacid dehalogenase-like hydrolase family protein | 1655 | 3e-184 |
| AT1G26130.1 haloacid dehalogenase-like hydrolase family protein | 1584 | 5e-176 |
| AT3G27870.1 haloacid dehalogenase-like hydrolase family protein | 1315 | 8e-145 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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