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Information for unigene UN16369

FASTA Sequence
Unigene ID: UN16369Length: 1112 SSR 
GGGAAGTCTGTATTTGTTCAATCTATCTCTTCACAGCCTCTCCTCCTCCTCCTCCAAAACTTGGCTGATCCCTCTCACAAAATCGC
CGATCAACCATGAGCAAAGGTCCAGGAATGTTCTCGGATATCGGCAAAAAAAGCCAAAGATCTGTTGACGAGAGACTACACCTCCG
ATCACAAATTCAGTATTCCACTTACAGTGCCTCCGGAGTGGCCCTTACGTCTACTGCTCTCAAGAAAGGAGGCGTGCATGCTGCTG
ATGTTGCCACTCAATACAAGTACAAGAATGCTGTCTTCGACGTCAAAGTCGACACGGATTCCACTATTTTGACAACAGTCACTTTC
ACTGAGATCCTCCCATCGACCAAAGCCATCGTCTCCTTCAAAGTCCCTGACAACAGTTCTGGCAAGCTCGAGGTCCAGTACTTCCA
CGACCACGCCACTGTTACCGCTGCTGCAGCTTTGAAGCAGAACCCGTTGATCGACATAACAGCCACTCTAGGTACACCAGTCATCT
CATTTGGTGCTGAAGCTGGATACGACACCTCCTCCAAAACTTTCACCAAGTACAACGCTGGAATCAGTGTGACCAAACCAGATGCT
TCCGCTTCCATTATATTGGGAGACAAAGGAGACTCAATCAAAGCATCTTACCTTCACCACCTTGACGAATCCAAGAGAAGTTCTGC
AGTTGGTGAGGTTTACAGGAAATTCTCGACTAATGAGAACACGATAACTGTTGGTGGGTCATACGCGATTGATCCTTCGACCTCGG
TGAAAGCTAAATTCAACAGCCGTGGCACACTCGGTGCTCTTTTTCAGCACGAGGTCTTGCCGAAATCCCTAGTGACTGTTTCCAGT
GAGATCGACACTAAGGCGTTGGACAAGCATCCAAGGTTTGGTCTTTCACTTGTTCTCAAACCTTGAGAGAACACACACACACAGAC
AAGAACATGAGATGAGTCTCCGTACCATTCTTCTATTCTCTCTCATTTGTTGAATTTTACGGCAGGATCCGTGGGTTTACTTTCCC
CACGAATAAGTAGTTCCGACGCAGTGCAATTGACGGATTAACTATTTTACGAATATGGTTTTTTTTATTGACATATTTTC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
AAW22622 porin-like protein [Brassica napus]11941e-128
NP_201551 voltage dependent anion channel 2 [Arabidopsis thaliana]11634e-125
XP_002866701 hypothetical protein ARALYDRAFT_496845 [Arabidopsis lyrata subsp. lyrata]11617e-125
XP_002877711 hypothetical protein ARALYDRAFT_323570 [Arabidopsis lyrata subsp. lyrata]10838e-116
NP_001190641 voltage dependent anion channel 2 [Arabidopsis thaliana]10659e-114

Swiss-Prot top hits (Blast detail)Scoree value
P42055 Mitochondrial outer membrane protein porin of 34 kDa6651e-068
P42054 Outer plastidial membrane protein porin6578e-068
P42056 Mitochondrial outer membrane protein porin of 36 kDa6344e-065
Q9SRH5 Mitochondrial outer membrane protein porin 16326e-065
Q9SMX3 Mitochondrial outer membrane protein porin 26245e-064

TrEMBL top hits (Blast detail)Scoree value
Q5MD14 Porin-like protein11947e-129
Q9FJX3 At5g6750011633e-125
Q6W2J2 VDAC2.110056e-107
C6TID5 Putative uncharacterized protein9894e-105
B9H6N6 Porin/voltage-dependent anion-selective channel protein9877e-105

Arabidopsis top hits (Blast detail)Scoree value
AT5G67500.1 VDAC2 (VOLTAGE DEPENDENT ANION CHANNEL 2); voltage-gated anion channel11641e-127
AT3G01280.1 VDAC1 (VOLTAGE DEPENDENT ANION CHANNEL 1); voltage-gated anion channel6334e-066
AT5G15090.1 VDAC3 (VOLTAGE DEPENDENT ANION CHANNEL 3); voltage-gated anion channel6254e-065
AT5G57490.1 VDAC4 (VOLTAGE DEPENDENT ANION CHANNEL 4); voltage-gated anion channel5904e-061
AT3G49920.1 VDAC5 (VOLTAGE DEPENDENT ANION CHANNEL 5); voltage-gated anion channel4938e-050

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
72  67%
 
101  33%

Unigene MembersMember information