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Information for unigene UN16382
| FASTA Sequence |
| Unigene ID: UN16382 | Length: 819 |
SSR | | GCCCAAATAGTGTGCATTATTATTAAGTCGAGAAGCAAGAGTATGCAACGATACATTGAGCAAGAAACAAATACCAAATCATACGA
AACCAAAAACACACAAACTTTCGGTGCTCCGTTTTATTTTCAAGGGTTTATTGGGAAGCAACAGAAAACTAGCGATTCATAAACTT
GATCATCGATCCAGCCATAGTCACTGAAACAAACAAACAAACAAACAATACCAATCTTCGTTCTATAAAGATTGACACCAAAAGCA
AGAGAAGATAGCTTGTACCTTATCGAATTAAGTGGATGGTGCAAGAAGTGGGCGAATCAAGTTAGGAACATGAGCCTGGTGATCCT
CAAGACGACCCTTAACACTGTCTCCATCCCAGCGAACAAGTGTTGGCACTCCGGTGACCTTGAATCGAGGATCGACTCTCCACGGA
TGCATCGGATTCCTCCACGTCGGTCTATCTCCGGCGTAAGCCCGAATAAGATTCACTTCCTCCGGTGATTCCTCTAGAGTCTTGTA
AATCACAGGCTCAGCCCTAACGCAATCTGATTGTAATCATGATAAAAAAAAAGATGATGAGAATTAGATGAAATTGAAAAAAACAA
TGAAAGCCCTAACGGGCCAGGACACCAGCTGCGGTTGGTGCTGGGATCATTGTTGGCGAGGAAGAGGATGAAATTGATCTTGTTAC
GGTTTGATTCGTCAGATTTCAATTCTTCCAACACCGTCTCCAAGGTTGAGGGATCTGCGTCCAGCTTCTTGAGAGTCATTTCTTTT
TTTCTCTACAATACTCAAGATTTCGGTTTCTTTACCAATTTCGTT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002863728 hypothetical protein ARALYDRAFT_917431 [Arabidopsis lyrata subsp. lyrata] | 433 | 1e-040 |
| AAM64350 unknown [Arabidopsis thaliana] | 423 | 2e-039 |
| NP_568614 thioredoxin-like protein Clot [Arabidopsis thaliana] | 417 | 8e-039 |
| ACU13745 unknown [Glycine max] | 355 | 1e-031 |
| XP_002513195 electron transporter, putative [Ricinus communis] | 322 | 8e-028 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9FMN4 Thioredoxin-like protein Clot | 417 | 4e-040 |
| Q5Z9Z3 Thioredoxin-like protein Clot | 240 | 1e-019 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| C6SWX2 Putative uncharacterized protein | 355 | 8e-032 |
| B9RHH6 Electron transporter, putative | 322 | 6e-028 |
| A9PBT3 Predicted protein | 313 | 6e-027 |
| A9NLL0 Putative uncharacterized protein | 296 | 6e-025 |
| C0PSG7 Putative uncharacterized protein | 295 | 7e-025 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G42850.1 INVOLVED IN: cell redox homeostasis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin-like fold (InterPro:IPR012336), Protein of unknown function DUF953, thioredoxin-like (InterPro:IPR010357); Has 237 Blast hits to 237 proteins in 83 species: Archae - 0; Bacteria - 0; Metazoa - 174; Fungi - 29; Plants - 21; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink). | 418 | 2e-041 |
| AT5G42850.2 INVOLVED IN: cell redox homeostasis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin-like fold (InterPro:IPR012336), Protein of unknown function DUF953, thioredoxin-like (InterPro:IPR010357); Has 237 Blast hits to 237 proteins in 83 species: Archae - 0; Bacteria - 0; Metazoa - 174; Fungi - 29; Plants - 21; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink). | 418 | 2e-041 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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