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Information for unigene UN16383
| FASTA Sequence |
| Unigene ID: UN16383 | Length: 1129 |
SSR | | GGACTCCTCCCAAAAGAACTGACTTCGCACCACTTTCTTCTTCTTCTTCTTCTTCTTCATTCTCTCTTTCTTCCATTCATTTGCCT
CTGGGTTAAGAGCCATGGTGGATACAGAGTTCCTCCGAACACTAGATCGCCAGATTCTCTTGGGTGTCTTCGTCGCTTTCGTCGCC
GTCGGTGCCGGTGCTGCTTACTATCTCTCTTCCTCCAAAAAACGCAGAGGGTGTTTGGATCCAGAGAACTTCAAGGATTTTAAGCT
TGTTAAGAAGCAACAGCTCAGTCACAATGTGGCTAAATTCGTGTTTGAGCTTCCAACTTCTACCTCCCTTTTGGGTCTTCCCATTG
GTCAACACATCAGCTGCAGGGGAAAAGATGCTCAAGGAGAGGATGTTGTTAAGCCTTACACTCCCACAACCTTAGATTCTGACCTT
GGACGTTTTGAACTTGTTATCAGGATGTATCCGCAAGGAAGGATGTCTCATCATTTCAGGGAGATGCGTGTTGGAGACCATCTTGC
TGTCAAGGGACCAAAGGGTAGGTTCAAGTATCAGCCAGGTCAGTTTAGGGCATTTGGAATGCTTGCTGGAGGTTCAGGCATCACTC
CCATGTTCCAAGTGGCAAGAGCAATTCTAGAAAACCCAACAGACAAGACACAGGTTCAGCTCGTTTACGCCAATGTCACATACGAG
GACATTCTCTTAAAGGAAGAATTGGAGAGTCTTACATCCAATTACCCAGACCAGTTCAAAATCTACTATGTTCTGAACCAGCCTCC
GGAAACATGGGATGGTGGTGTTGGATTTGTATTTAAGGAAATGATTCAGGCCCATTGCCCTGCACCAGCTTTTGATATTCAGATCC
TGAGATGTGGACCACCGCCGATGAACAAGGCCATGGCTGCAAACCTTGAAGCTCTTGGTTACTCTCCAGAGATGCAATTCCAGTTC
TGATCTGAATACTCTGCTTTTGATTGCTTCTCCACAAAATAGAGCTATTTAAAAAAAAAACTCGTGTCTCTGATCAATAATGAGTG
TTTCGCTGTCTTAATTGAGTGAGAGTTGTGTTTCTATTAGAGGCTTCATAACCCATTGTGTTTGTTTGACGGTTTCTTATCTCGTT
GGATTCTGACT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_197279 cytochrome-b5 reductase [Arabidopsis thaliana] | 1380 | 3e-150 |
| XP_002873852 hypothetical protein ARALYDRAFT_909780 [Arabidopsis lyrata subsp. lyrata] | 1371 | 3e-149 |
| AAV69019 NADH:cytochrome b5 reductase [Vernicia fordii] | 1219 | 1e-131 |
| ACU19291 unknown [Glycine max] | 1215 | 4e-131 |
| XP_002319200 predicted protein [Populus trichocarpa] | 1177 | 1e-126 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q4PGW7 NADH-cytochrome b5 reductase 1 | 676 | 5e-070 |
| Q6BUX2 NADH-cytochrome b5 reductase 1 | 662 | 2e-068 |
| Q59P03 NADH-cytochrome b5 reductase 1 | 651 | 4e-067 |
| A5DQ25 NADH-cytochrome b5 reductase 1 | 651 | 4e-067 |
| Q6CID0 NADH-cytochrome b5 reductase 1 | 642 | 5e-066 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9ZNT1 AT5G17770 protein | 1380 | 2e-150 |
| Q5PY86 NADH:cytochrome b5 reductase | 1219 | 9e-132 |
| C6TBT9 Putative uncharacterized protein | 1215 | 3e-131 |
| B9I658 Predicted protein | 1177 | 7e-127 |
| C5YZX1 Putative uncharacterized protein Sb09g023850 | 1165 | 2e-125 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G17770.1 ATCBR (ARABIDOPSIS THALIANA NADH:CYTOCHROME B5 REDUCTASE 1); cytochrome-b5 reductase | 1381 | 8e-153 |
| AT5G20080.1 NADH-cytochrome b5 reductase, putative | 518 | 1e-052 |
| AT1G77760.1 NIA1 (NITRATE REDUCTASE 1); nitrate reductase | 268 | 9e-024 |
| AT1G37130.1 NIA2 (NITRATE REDUCTASE 2); nitrate reductase (NADH)/ nitrate reductase | 266 | 2e-023 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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