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Information for unigene UN16391

FASTA Sequence
Unigene ID: UN16391Length: 1059 SSR 
GCCGAAGAAGATGGTATTCCATAACAGAATAAACAATAACAGAGTTCATTCAAATTCATATGTTTGTGTAAATTTTGGTTAAAAAA
CCCCGAATAAAATCCACAGAGAGAGAGAGACTAAAGGGTTTATACAACCAAGCCAGCTTCCAATAACAAGTAAACAAAAAAACAAA
TGCTTCGAGTTTCATCTATCAATCCGGAAGACTCAGATGATGATGCAGAGAGAAACTTACACACTCTTCTAATCCTTCTTCTTGAT
GAAGGCTCCTCTGGGGATTTTGCTCATCACCTTGCTCAAAACCTTTTCATCGAGCACAGCGTATTGCTTCTTGATCTCCTTCATCG
CCTTTTCAGCAAAGTCATCTACTTTATCATCATACTTTTCGTAAAGCACGGGAACGGTGAAGAGAAGAACAGTTGCGATATAGATC
AAGGTCAAGAAGTTGCATGGGCTACCAACTTTGGACAAAACCCACAAACCAGCAACAACCATAAGGAACTTCTTGAGATCTCTCCC
TAACGCAATGTTCCTAAGAAGAGTAAAACCACGATTGATTTCAATCCTTAGTCCAGAAGCAAGCTGGAGAACGACTTCCTCGGGGA
TGTGAACTTCAGGGATATGAGGAGGTGTCTTGTGAATGAAGGTAGTAGCACTAGACCACAAGAACAACACTGCGAGAGCGAGAATC
GAGATGTGGCCGAAGAGAGTGAGGAGGTTGTACTGAAGCAACTCGAACAAGATCCAGGAGAGAGTTGCAGCACCCAACACTCCTCC
TGATACCTTCTTGTTCCTCCATAGGAATATGTCGGCAGGTTTGCCGCCACCGAAGACCTTGTGAACAGGCTTTTCTCTTCCGAAGA
GGCGGAAGATCTTCGTCTTGATAGAGGATTCTTTCTTCTCGTCATCTGAATCTGAAGAAGAAGAGGAATCGTGACCATGGATCTTC
TCAGCTATCTTCTCCATGATTGATTCCTCGTGTTTGTGCTCTTCCGCCATCGTTACTTTACTTCCTTGAAACCTCCGCAAAACCAC
TCTCTCGCTTGGTTCAGACGTGAATCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002887921 reticulon family protein [Arabidopsis lyrata subsp. lyrata]11591e-124
NP_176592 reticulon-like protein B3 [Arabidopsis thaliana]11303e-121
BAH57206 AT1G64090 [Arabidopsis thaliana]10301e-109
XP_002870630 VIRB2-interacting protein 3 [Arabidopsis lyrata subsp. lyrata]10084e-107
NP_198975 reticulon-like protein B4 [Arabidopsis thaliana]10022e-106

Swiss-Prot top hits (Blast detail)Scoree value
Q9SH59 Reticulon-like protein B311301e-122
Q9FFS0 Reticulon-like protein B410028e-108
Q9SUR3 Reticulon-like protein B18503e-090
Q9SUT9 Reticulon-like protein B28442e-089
O82352 Reticulon-like protein B58281e-087

TrEMBL top hits (Blast detail)Scoree value
C0Z3C7 AT1G64090 protein10307e-110
B9RCJ7 Putative uncharacterized protein9052e-095
B3TLN1 24 kDa seed maturation protein8802e-092
A9PAK3 Predicted protein8765e-092
B2WS91 Reticulon family protein8667e-091

Arabidopsis top hits (Blast detail)Scoree value
AT1G64090.1 reticulon family protein (RTNLB3)11317e-124
AT5G41600.1 BTI3 (VIRB2-INTERACTING PROTEIN 3)10035e-109
AT4G23630.1 BTI1 (VIRB2-INTERACTING PROTEIN 1)8503e-091
AT4G11220.1 BTI2 (VIRB2-INTERACTING PROTEIN 2)8441e-090
AT2G46170.1 reticulon family protein (RTNLB5)8281e-088

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
72  67%
 
111  33%

Unigene MembersMember information