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Information for unigene UN16403

FASTA Sequence
Unigene ID: UN16403Length: 910 SSR 
AACTCGAGCGTGGACAAAAAAGAGAATGGGGTGGGTGAGAGAGAGAGAATTGGCGACCCTTAGATTCAGTCGTAATATCTCTTCCG
ATCATCTGTGTGTTCTTATCGAATTGATAAACTTCTGTTGTGTGAGTTAGTTTCTTGAAGAAGCAATGATTGGACTGTTTAAAGTA
AAGGAGAAGCAAAGGGAACAAGCTCAGAACGCTAGCAGAGGAGGAGGAGCTTCTGTCAAGAAGCAATCTGCCGGTGAACTTCGTCT
CCACAAAGATATATCAGAGTTGAATCTTCCAAGCTCTTGCACGATATCATTTCCCAATGGCAAAGATGATTTGATGAACTTTGAAG
TCTCCATTAAACCCGATGATGGTTACTACCATAATGGTAAGTTTGTTTTCACCTTCCAAGTCTCTCCTGTCTATCCTCATGAAGCT
CCTAAAGTTAAATGCAAAACCAAGGTTTATCATCCCAATATCGATTTGGAAGGAAACGTTTGCCTCAACATCTTGCGTGAAGACTG
GAAACCTGTTCTCAACATTAACACTGTCATCTATGGTCTCTTCCATCTTTTCACGGAACCCAACTCTGAAGATCCTTTGAACCATG
AAGCTGCTCAGGTTTTAAGGGATAACCCAAAGCTCTTTGAGACCAATGTCCGGAGGGCTATGACCGGTGGATATGTTGGTCAAACC
TTTTTCCCGCGCTGTATCTAATAAAAAAGCTCTGGTTGGTCTTCTTCGAGCATAAAGCTAAGAACCTAAACCCACTTTATCCTCCA
ATGTAATTCCTGTCTCAAAGGACCCTTGTTTGTTTGCTTGCCTTTGAAAGATTACGTTCTCCCTTTCCCTTAGAGAGTCTCAAAAA
TGTGGATTTGGTTTGTTCGGTTTCAGTTTATAAGTGTGTGGTAATTAATG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
ACI16426 RUB1-conjugation enzyme [Brassica juncea]9643e-102
BAJ33605 unnamed protein product [Thellungiella halophila]9482e-100
NP_001154289 NEDD8-conjugating enzyme Ubc12 [Arabidopsis thaliana]9473e-100
XP_002886185 hypothetical protein ARALYDRAFT_343491 [Arabidopsis lyrata subsp. lyrata]8703e-091
XP_002525098 ubiquitin-conjugating enzyme m, putative [Ricinus communis]8668e-091

Swiss-Prot top hits (Blast detail)Scoree value
Q9SDY5 NEDD8-conjugating enzyme Ubc129471e-101
Q9ZU75 Probable NEDD8-conjugating enzyme Ubc12-like8378e-089
A3KN22 NEDD8-conjugating enzyme Ubc126083e-062
P61081 NEDD8-conjugating enzyme Ubc126083e-062
P61082 NEDD8-conjugating enzyme Ubc126083e-062

TrEMBL top hits (Blast detail)Scoree value
B6E0M7 Ubiquitin carrier protein9642e-102
B9SGH9 Ubiquitin carrier protein8666e-091
C6SV99 Ubiquitin carrier protein8551e-089
A9PAZ9 Ubiquitin carrier protein8487e-089
A5AHT5 Ubiquitin carrier protein8371e-087

Arabidopsis top hits (Blast detail)Scoree value
AT4G36800.1 RCE1 (RUB1 CONJUGATING ENZYME 1); NEDD8 ligase/ small conjugating protein ligase9481e-102
AT4G36800.2 RCE1 (RUB1 CONJUGATING ENZYME 1); NEDD8 ligase/ small conjugating protein ligase9481e-102
AT2G18600.1 RUB1-conjugating enzyme, putative8386e-090
AT5G56150.1 UBC30 (ubiquitin-conjugating enzyme 30); ubiquitin-protein ligase2436e-021
AT5G56150.2 UBC30 (ubiquitin-conjugating enzyme 30); ubiquitin-protein ligase2436e-021

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
122  33%
 
114  67%

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