Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN16408

FASTA Sequence
Unigene ID: UN16408Length: 944  SNP
GGGGACTCATTTGTCTCTCTTCTTCCCCCTCCGCGCCGCGCTCTCGTTTCACTTCCTCTCAAAGAGAAATGGCTGAATCCAAGGTG
GTGGTTCCAGAGTCTGTGCTAAAGAAGATCAAGAGGGAAGAGGAATGGGCATTGACCAAGAAACAGGAAGCTGCAGCTGCTAAGAA
GAAGAGTGTTGAGACCAGGAAGCTTATCTTCAAAAGAGCTGAGCAATATGCTAAAGAATACGCCGAGCAGGATAACGAGTTGATCC
GTTTGAAGCGTGAGGCTAAGTTGAAAGGAGGGTTCTATGTTGACCCTGAGGCTAAATTGCTCTTTATCATTCGTATCCGTGGAATC
AACGCTATTGACCCAAAAACCAAGAAGATTCTGCAGCTCTTGCGTTTAAGACAAATCTTCAATGGTGTGTTCCTTAAGGTGAACAA
GGCAACAATCAACATGTTGCGTCGTGTTGAGCCTTACGTGACTTACGGATACCCAAACTTGAAGAGTGTCAAAGAGCTAATCTACA
AGAGGGGTTTTGGAAAGCTGAACCACCAGAGGATAGCACTCACTGACAACTCCATAGTGAATGAAGCTCTAGGAAAGCACAACATC
ATCTGCGTTGAGGATCTGATCCACGAGATCATGACCGTTGGACCTCACTTCAAGGAAGCCAACAACTTCCTCTGGCCATTCCAGTT
GAAGGCACCACTCGGTGGCCTTAAGAAGAAGAGGAACCACTACGTTGAAGGTGGTGATGCTGGAAACAGAGAGAATTTCATCAACG
AGCTTGTCAGGAGGATGAACTGATGAATGCCTCCATTCTTTTATCTTCCCCATTTCATAGTTTTTTTTTGTTTGGATCTGAGCGTT
TTGTTTTGACCGTGTAATCTTAGTCGAATATAGGCTTTGATTAATAAACTTTGTTTTGTTTTCTATAATCCATGTTGATCACAT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_850411 60S ribosomal protein L7-3 [Arabidopsis thaliana]11983e-129
XP_002862275 60S ribosomal protein L7 [Arabidopsis lyrata subsp. lyrata]11965e-129
NP_850410 60S ribosomal protein L7-3 [Arabidopsis thaliana]11931e-128
XP_002880084 60S ribosomal protein L7 [Arabidopsis lyrata subsp. lyrata]11931e-128
AAO00739 Unknown protein [Arabidopsis thaliana]11867e-128

Swiss-Prot top hits (Blast detail)Scoree value
P60039 60S ribosomal protein L7-311935e-130
P60040 60S ribosomal protein L7-211381e-123
Q9LHP1 60S ribosomal protein L7-411291e-122
P14148 60S ribosomal protein L77553e-079
Q58DT1 60S ribosomal protein L77535e-079

TrEMBL top hits (Blast detail)Scoree value
Q3EBG6 Putative uncharacterized protein At2g44120.211982e-129
Q38HU4 Thaliana 60S ribosomal protein L7 (At2g44120)10871e-116
B9HK59 Predicted protein10791e-115
C9E0S6 Putative uncharacterized protein10744e-115
A9PGL2 Putative uncharacterized protein10701e-114

Arabidopsis top hits (Blast detail)Scoree value
AT2G44120.2 60S ribosomal protein L7 (RPL7C)11998e-132
AT2G44120.1 60S ribosomal protein L7 (RPL7C)11943e-131
AT2G01250.1 60S ribosomal protein L7 (RPL7B)11397e-125
AT3G13580.3 60S ribosomal protein L7 (RPL7D)11308e-124
AT3G13580.2 60S ribosomal protein L7 (RPL7D)11308e-124

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
63  27%
 
77  64%
 
81  9%

Unigene MembersMember information