Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN16426

FASTA Sequence
Unigene ID: UN16426Length: 726 SSR 
TTAGATTAATATCAAACCATACAAGGCAATGCGAGGAGGAGAGGAAGAAAAGAAGAGATAGGGATGGTTCACAGAGGAAATGCCAG
AAAGGATAAAATGAAGAGTTTCAGTTTGAGATTTACTTTTATGATCTCATTCCAAAGAGTATCAAGATTCACTCACAATAAACATT
TTTAAGTACATCTTAGTGAACTCAACAGTGAGATCTCCCATAGATCGCATAATCTTCTTCTTCTTCTTCCTAATCGTCGTCCACCC
CACGACGCCTCTGGATCGTGACTTTTGTCTGTTTGGTTGTTTGGCTGTTTATTTGTTCCAACAGCGTTATCAGTCGCTCCTCAGAA
ACCTTCTCAACAATCTGTCCCATTTGAGCAGCCCTCAAAATAACATCCTCAACACCTTTAGCTTTCTCCGGTTTCACAAGGGCAAT
TCGAGCAATTCTCTCACGGGCTTGGGAAGACAATATTTGACTAAGCATCATCTGTCTCCGTTCATCAGCTTCCCTTTTAGCATCTT
CTTGAGCTCTCTCTTGATCTGGATTCTGTTGGTTGCCCTGCTTCCCAGTGCCATGTCGAGCCATGAGCTCTTGCATTCTCCTCTGT
CTAATAGCTTCTAGTTCAGGATCAGCCATTGGAGCAGTCTTCTTCTTCTTCTTCCTTCCTCTGGATGCCAAATCTCTGTGTTGCGC
CTCGAATCCAACGCAGAGCAGCTCCGAAGAGGAATCCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_564336 double-stranded DNA-binding-like protein [Arabidopsis thaliana]5942e-059
AAM64794 unknown [Arabidopsis thaliana]5914e-059
XP_002890834 hypothetical protein ARALYDRAFT_473195 [Arabidopsis lyrata subsp. lyrata]5871e-058
NP_849728 double-stranded DNA-binding-like protein [Arabidopsis thaliana]5824e-058
NP_001154384 double-stranded DNA-binding-like protein [Arabidopsis thaliana]5583e-055

Swiss-Prot top hits (Blast detail)Scoree value
Q54YS0 DNA-binding protein DDB_G02781112571e-021
O13929 Uncharacterized protein C23C4.09c2552e-021
O14737 Programmed cell death protein 52174e-017
Q5RBT0 Programmed cell death protein 52174e-017
Q2HJH9 Programmed cell death protein 52166e-017

TrEMBL top hits (Blast detail)Scoree value
Q9FXG0 At1g29850/F1N18_195941e-059
Q8LBF6 Putative uncharacterized protein5913e-059
B4UW59 Double-stranded DNA-binding protein5232e-051
A9PGX0 Predicted protein4972e-048
B9S167 Programmed cell death, putative4928e-048

Arabidopsis top hits (Blast detail)Scoree value
AT1G29850.1 double-stranded DNA-binding family protein5956e-062
AT1G29850.2 double-stranded DNA-binding family protein5832e-060
AT1G29850.3 double-stranded DNA-binding family protein5581e-057

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
76  86%
 
111  14%

Unigene MembersMember information