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Information for unigene UN16434

FASTA Sequence
Unigene ID: UN16434Length: 1113  SNP
CCCCAATTATATGATCCTCGAGTCATCATCACACGAGGTCCGAATTGCCATTATTATTATAAAAACTAATTTCTAGCCAAGGGTTG
TTTGCTAGCAAAAATATTAAATTACATCTCAAAGTCTCTAGTAAAATTAAAAGTTTAAAACAAGCTCAAGCAATCCTTTTATAAAG
CTTCTTATACCACACCAGAAGGAAGACGAAAAACGAGCTGTCCACCCATTAAACTCTGAACATAGTAATAGCAAAAATCTGCAAGG
ATGAAAGTTTGGATAATTTCAGAGAGGAGGACCATTAAAGGCCATAGTCCATACCCTAATGCAGTCAGCAACCTCCCTCTCGTATC
CAACACCTGAAGGATCCAGTGTGCACAACTCAAGAACCTAGCGATTCCCAAAGCAAATACGTAATGTGCTGTGAATGGTTCCACGA
TCTTAGTGTTCTGCATGACTCTTAATTGAGGAAGAACTGAAACAGCTTCAAGATAAACACAGAAGGCCCAAAAGAGCCTGTTTATG
ATGTGGTGGCGTGTTGATGGATGAATGAGCAAAGATACAACAGCGCATGGGGCTACAACGTAGTAGATGGGAAAGTTGTCTTTGTC
TTCCATATACGTGGGTCTAAGGTTGAAACGGATCATATAAATGACCCAAAGGGTGGTGGCCAAAGTAGCAGAATCAAGTAACGTGT
GAAGATCAAACTCCATTACAAAGCTACAATACAACCGCACAGCCAGAAACAAAGCCGTTAGCTCCTGCGACTTGAGAGATATCCCA
GCGCATGTCTTCTCCTTCGTGAGTTTATAGATAAGAACGGAGATCCCAACGGCATGGACAGCCTCGGACGCGATGAAAAGGTTGTC
GTGCTCGTGTACAATGACCCTGAGGAAGACGAGGATCGTCATTGCCGTAACCACGCAAAGAAACGCCTTAACCTTCGGTGGCTGCC
GGCGAATCCACGACGTCACGGTCTGAATCGGACTCTTCTCCGCCTTCATCTTTTAGATCTTTCTCTCTATTGGCTCTGATGATATG
AGTGTGTGATTATTACTAATTAACTTCGTCTTTCGTTTTCAAATGGAGAATGAATGAATCTGGCATGTTTCTTTAACGCCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_173426 ER lumen protein retaining receptor-like protein [Arabidopsis thaliana]12891e-139
XP_002889042 ER lumen protein retaining receptor family protein [Arabidopsis lyrata subsp. lyrata]12352e-133
XP_002893082 hypothetical protein ARALYDRAFT_312925 [Arabidopsis lyrata subsp. lyrata]12352e-133
NP_177704 ER lumen protein retaining receptor family protein [Arabidopsis thaliana]12262e-132
AAF79915 Contains similarity to ER lumen protein retaining receptor from Caenorhabditis elegans gi|6686285 and contains ER lumen protein retaining receptor PF|00810 domain [Arabidopsis thaliana]12218e-132

Swiss-Prot top hits (Blast detail)Scoree value
Q09473 Putative ER lumen protein retaining receptor C28H8.42813e-024
P48583 ER lumen protein retaining receptor2643e-022
Q611C8 ER lumen protein retaining receptor2625e-022
O44017 ER lumen protein retaining receptor2617e-022
O94270 ER lumen protein retaining receptor2609e-022

TrEMBL top hits (Blast detail)Scoree value
Q84TL5 At1g7576012261e-132
Q9LNS6 T20H2.24 protein12215e-132
B9STD7 ER lumen protein retaining receptor, putative12091e-130
B8BDV6 Putative uncharacterized protein12028e-130
Q69SG3 ER lumen protein-retaining receptor-like12028e-130

Arabidopsis top hits (Blast detail)Scoree value
AT1G19970.1 ER lumen protein retaining receptor family protein12903e-142
AT1G75760.1 ER lumen protein retaining receptor family protein12276e-135
AT4G38790.1 ER lumen protein retaining receptor family protein11702e-128
AT2G21190.1 ER lumen protein retaining receptor family protein11594e-127
AT3G25160.1 ER lumen protein retaining receptor family protein8442e-090

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
114  40%
 
122  20%
 
102  20%
 
81  10%
 
71  10%

Unigene MembersMember information