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Information for unigene UN16448

FASTA Sequence
Unigene ID: UN16448Length: 1117  SNP
GGTATGCCATGGCGTCCCATGTATGTATCCTCTATTTTTTTTGTCAAAAGTAAATGACATAGTTTCATATTACTAAACCATAAAAA
AGACAAAAATAAAACGCATTGCAAACTTATATGAAAACATCATTTTTCCTCTAACATCATCATTTCACATTAACCATCGTTTATAA
AAAGGTTTTAAGGACACTTGGGTCTGCCACCACGTGTCTTCATGTTGACGTAACAAGATCCACATTTTTCCTTATTACCGTACGTG
CCAGGAGGAACGCACTTGCAGCGGTAGCAGCACGTGACGCACGCTCTCATACATACGTTCTTCCTCGAGTGTTGCCCACATCGAGT
CCCACATAAAGACACGCAATCTATTCGAGGTCTCACAGGAGACGGTGTCGGAGGTTTGGCTGGCGGCTTAACCGGAGGTGATGGAG
TTGGGTTGACGGGTGGTTTGGATGGTGGTGGAGACGTAGTCGGTGGTGCCTTATATGGAGGTATTGGGGTTGGTTTAACCGGTGCT
GTAGGCGGTTTGACTGGTGGTATCGTGGGTGGTTTAACTGGTGGCGTTGGGGGTTTGTACATAGGTGGTTGAACCGACGGTGGTTT
GACCGGTGGTGTTGTCGGTGGTTTAACCGTTGGCGTTGGGGGTTTGTAAGTAGGTGGTGGTTTGACTGGTGCTATCGTTGGTGGCT
TAACCGATGGCGTTGGGGGTTTGTACGTAGGTGGAGGTTTGAGTGGTGGTGTCGTGGGTGGCTTAACCGGTGGCGTTGGGGGTTTG
TATGTAGGTGGTTTGACCAGAGGTGATGTGGGTGGTTTAACCGGAGGAGTTGGGTATGATGTAGCTGGTGGTTTTGTTGGTGTAGC
CGGAGTGGTTGGTGGTTTAACCGGAGGTGTTACGGTGGGTGGTTTAATAGGAGTAGTAGGCAGTGAGGGTGGCTTGTATGACGGAG
ACGGTGGTTTGTTTGCCGGGGACGTCGGTGACGTTGGTAAAGAAACTAATGCACTGGATTCCTCGTTTGAAGCCGCAAAAACAACA
TTGGTAAAGACTGGAAGAAAAATGAAGACTGAAAGAAGCGGGAGAGACATGTTGTGAGAGATGAGGAAGCGGTGCAGTCTCATCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_196996 gibberellin-regulated protein [Arabidopsis thaliana]8184e-085
AAM64739 unknown [Arabidopsis thaliana]8103e-084
BAH56985 AT5G14920 [Arabidopsis thaliana]7243e-074
ABA41399 pherophorin-C1 protein precursor [Chlamydomonas reinhardtii]5041e-048
CAD22154 pherophorin-dz1 protein [Volvox carteri f. nagariensis]4994e-048

Swiss-Prot top hits (Blast detail)Scoree value
P14918 Extensin4283e-041
Q9FPQ6 Vegetative cell wall protein gp14221e-040
P24152 Extensin4193e-040
Q02817 Mucin-23559e-033

TrEMBL top hits (Blast detail)Scoree value
Q9LFR3 AT5g14920/F2G14_408183e-085
Q8LBI7 Putative uncharacterized protein8102e-084
C0Z2Q6 AT5G14920 protein7242e-074
Q3HTK6 Pherophorin-C1 protein5047e-049
Q8L685 Pherophorin-dz1 protein4993e-048

Arabidopsis top hits (Blast detail)Scoree value
AT5G14920.1 gibberellin-regulated family protein9831e-106
AT5G14920.2 gibberellin-regulated family protein6783e-071
AT2G27380.1 ATEPR1; structural constituent of cell wall5181e-052
AT3G22120.1 CWLP (CELL WALL-PLASMA MEMBRANE LINKER PROTEIN); lipid binding4329e-043
AT1G44191.1 Encodes a ECA1 gametogenesis related family protein4069e-040

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
84  22%
 
103  17%
 
68  44%
 
122  11%
 
91  6%

Unigene MembersMember information