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Information for unigene UN16449

FASTA Sequence
Unigene ID: UN16449Length: 1008 SSR 
GGGAAAAATCCTGTTCGTCCATTTCAGTGGTTCTGCTGCTTCCTTCGTATAAGATGCCACATGATATCGGATTGACTAGTGATCCA
AATCTTATGTCAGACACACAATTGTAATCTGCTTTCGCAAATATTTTTACAATTTTTTTTTTTTTTTAAAGTCGCACACTTTAGAG
TTTCAATACAAATCAATTAGCTCTCTCCTCTCCCTACTACTATTGTTCTTGCTTCTAGCTGCGGAAAGTGAGACTCTTCTTGAAAG
GTTGAAAGTGAGGGTGGGATTGCTTTTTAAAGTGTGAAGAAGAAGAAGAAGATCAAAAAATGGCTTTGGAGTACGAGTCTCTGAAT
GAAAACGTGAAGAAGAAGAAGAAGAAGAAGAGATATACAAGGTTGCATCAATCGCCCTGAGTCCGAATGTCTCTGCGCAGATCTTT
ATGGGTTTGATGGTTAGTCCTCCAAAGCCTGGAGACATTTCATATGACCAGTTCGCCCGTGAAAGCAAGGGGATTCTTGAATCTTT
GAGAAGAAGAGCAAGGATCATGACTGATGGATTCAACAGCTGCAAAAACGTTGTCTGCAATTTCACAGAAGGTGCGATGTATTCGT
TTCCTCAAATACGGTTACCTCCGGGTGCTCTCCAAGCTGCTAAACAAGCAGGAAAAGTGCCAGATGTTTTCTACTGTTTGAAGCTC
TTAGAAGCCACAGGAATCTCCACAGTGCCTGGCTCTGGTTTTGGACAGAAAGAAGGTGTGTTCCTTCTGAGGACAACGATCTTGCC
TGCGGAAGAAGAGATGCCAGAGATCATGGACAGTTTCAAGAAGTTCAACGACGAGTTCATGACTCAGTATGAGAATAGCTTTGGTT
ATTCCAGAATGTGATTTACTTCTCTCTTCTTGTTATGATGATGATGGAACCACTATTGTGTTCTTCTGCTACACTCTTTTAAAAAG
CTAAATCTCCGTAGTACTCTCTTTCTTCTCTATCTTATATAAACTCTCTCTCTTTACTTCCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002893277 alanine-2-oxoglutarate aminotransferase 1 [Arabidopsis lyrata subsp. lyrata]8336e-087
NP_564192 glutamate:glyoxylate aminotransferase [Arabidopsis thaliana]8292e-086
AAL24255 At1g23310/F26F24_4 [Arabidopsis thaliana]8292e-086
AAK68842 alanine aminotransferase-like protein [Arabidopsis thaliana]8292e-086
AAK25905 putative alanine aminotransferase [Arabidopsis thaliana]8175e-085

Swiss-Prot top hits (Blast detail)Scoree value
P34106 Alanine aminotransferase 24418e-043
Q54MJ7 Probable alanine aminotransferase, mitochondrial4292e-041
P52894 Alanine aminotransferase 24184e-040
Q6GM82 Alanine aminotransferase 23843e-036
Q8BGT5 Alanine aminotransferase 23817e-036

TrEMBL top hits (Blast detail)Scoree value
Q93Z05 At1g23310/F26F24_48291e-086
Q94B22 Alanine aminotransferase-like protein (Fragment)8291e-086
Q9LR30 At1g23310/F26F24_48291e-086
Q9C5K2 Putative alanine aminotransferase8173e-085
Q8LFE9 Putative alanine aminotransferase8083e-084

Arabidopsis top hits (Blast detail)Scoree value
AT1G23310.1 GGT1 (GLUTAMATE:GLYOXYLATE AMINOTRANSFERASE); L-alanine:2-oxoglutarate aminotransferase/ glycine:2-oxoglutarate aminotransferase8306e-089
AT1G70580.1 AOAT2 (ALANINE-2-OXOGLUTARATE AMINOTRANSFERASE 2); L-alanine:2-oxoglutarate aminotransferase/ glycine:2-oxoglutarate aminotransferase8092e-086
AT1G70580.2 AOAT2 (ALANINE-2-OXOGLUTARATE AMINOTRANSFERASE 2); L-alanine:2-oxoglutarate aminotransferase/ glycine:2-oxoglutarate aminotransferase8092e-086
AT1G70580.3 AOAT2 (ALANINE-2-OXOGLUTARATE AMINOTRANSFERASE 2); L-alanine:2-oxoglutarate aminotransferase/ glycine:2-oxoglutarate aminotransferase8092e-086
AT1G70580.4 AOAT2 (ALANINE-2-OXOGLUTARATE AMINOTRANSFERASE 2); L-alanine:2-oxoglutarate aminotransferase/ glycine:2-oxoglutarate aminotransferase8092e-086

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
121  33%
 
112  67%

Unigene MembersMember information