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Information for unigene UN16453

FASTA Sequence
Unigene ID: UN16453Length: 1176 SSR 
GGAGCCAATAACCGGTACGATATCAATTACGAATAACGATTGATAAGAACCGGGTTTTATCTGTAAAGGGAGGACACGTCTCTCTT
TAGCAAAACCCTAAAGAAGCGAGCAAAGTTACAGAGCGTCGTCGTCTTCTTCTTCCATCTTCCGAACCGACCGTTACTAGCTCCTT
CTTCTTCTTCTTCTTATTCTTCTTCTGACGGTTGTGCAGCTGCTGAGGAAAGATGCAGAGCGAGGAATCTAACGAGCTTGCTAATG
GAGTATCCAAGGAGGAGGAGGAGACTAAGGAAACAGTGAAGAAGAGTCAAAAGGCGGATAGAAAGAAAAAGAAGTTGAAAGAGAAG
TTGCTAAAGGAAGCTACTAAGGCTGATAACAGAGGAGTTTGCTACTTGAGCCGTATCCCACCACACATGGATCACGTTAGACTTCG
CCAGATTCTCTCTCAGTTTGGTGAAATTGATAGGATTTATCTTGCTCCTGAAGATCCTGAAGCACAAGTTCATCGCAAGAAGGCTG
GTGGGTTTCGTGGCCAACTCTTCTCTGAAGGGTGGGTGGAGTTTGCTAAGAAAACCGTAGCTAAGAGAGTCGCTGATATGCTAAAT
GGAGAACAGATAGGGGGAAAGAAGAAGTCAGCTATATACTATGATATTTGGAACATCAAATACTTGACCAAGTTCAAATGGGATGA
TCTCACCGATGAAATTGCATACAAAAGTGCAATACGGGAACAGAAACTGAATATGGTTATGTCTGCTGCTAAAAGAGAGAAGGACT
TTTATTTATCTAAAGTAGAGAAGTCTCGTGCCATGACCGAGATTGATGAACGGATGAAGAAGAAGCGAAAGATTCAGGAAGAATCA
GGCAGCAACGCAGAACCAGCGCAAGTTTTCCCCCCTAGGGTGGTTCGTCAGTTCAGACAGAAGATAGCAATCAAAAATGAGGTGTT
TCAGAGCAAACCTGGTCTCTCCACAGATGTCCTAGCATCGGTTTTCGGCGGTTTTTAAAGATTAAGAAGAGGCATGTGAAGATATT
GCAGTTTGATCAAAGGCTTTATAATATGTATGAATGGCTTTTCCCATTAGTTTTTGCATGTCAACAGAGTGAACCTTCACATACAC
TTTTTTAGCTTTTTTGTTACTAAGAATATGAATTAAAACAAATTTTGATACTTTTTTT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002878090 hypothetical protein ARALYDRAFT_486092 [Arabidopsis lyrata subsp. lyrata]11322e-121
NP_191210 RNA recognition motif-containing protein [Arabidopsis thaliana]11187e-120
CAB88054 putative protein [Arabidopsis thaliana]11081e-118
CBI15766 unnamed protein product [Vitis vinifera]8947e-094
XP_002284683 PREDICTED: hypothetical protein [Vitis vinifera]8883e-093

Swiss-Prot top hits (Blast detail)Scoree value
Q6CFT1 Pre-rRNA-processing protein ESF24355e-042
Q6BSS5 Pre-rRNA-processing protein ESF24249e-041
Q59YL9 Pre-rRNA-processing protein ESF24168e-040
Q6CSP8 Pre-rRNA-processing protein ESF24079e-039
A3LVD5 Pre-rRNA-processing protein ESF23934e-037

TrEMBL top hits (Blast detail)Scoree value
Q6NM71 At3g5651011185e-120
Q9LXY9 Putative uncharacterized protein T5P19_16011087e-119
A5BED4 Putative uncharacterized protein8668e-091
B9SJ78 Activator of basal transcription, putative7602e-078
B9GIL4 Predicted protein6947e-071

Arabidopsis top hits (Blast detail)Scoree value
AT3G56510.1 TBP-binding protein, putative11282e-123
AT3G56510.2 TBP-binding protein, putative11282e-123

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
113  33%
 
83  33%
 
63  33%

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