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Information for unigene UN16453
| FASTA Sequence |
| Unigene ID: UN16453 | Length: 1176 |
SSR | | GGAGCCAATAACCGGTACGATATCAATTACGAATAACGATTGATAAGAACCGGGTTTTATCTGTAAAGGGAGGACACGTCTCTCTT
TAGCAAAACCCTAAAGAAGCGAGCAAAGTTACAGAGCGTCGTCGTCTTCTTCTTCCATCTTCCGAACCGACCGTTACTAGCTCCTT
CTTCTTCTTCTTCTTATTCTTCTTCTGACGGTTGTGCAGCTGCTGAGGAAAGATGCAGAGCGAGGAATCTAACGAGCTTGCTAATG
GAGTATCCAAGGAGGAGGAGGAGACTAAGGAAACAGTGAAGAAGAGTCAAAAGGCGGATAGAAAGAAAAAGAAGTTGAAAGAGAAG
TTGCTAAAGGAAGCTACTAAGGCTGATAACAGAGGAGTTTGCTACTTGAGCCGTATCCCACCACACATGGATCACGTTAGACTTCG
CCAGATTCTCTCTCAGTTTGGTGAAATTGATAGGATTTATCTTGCTCCTGAAGATCCTGAAGCACAAGTTCATCGCAAGAAGGCTG
GTGGGTTTCGTGGCCAACTCTTCTCTGAAGGGTGGGTGGAGTTTGCTAAGAAAACCGTAGCTAAGAGAGTCGCTGATATGCTAAAT
GGAGAACAGATAGGGGGAAAGAAGAAGTCAGCTATATACTATGATATTTGGAACATCAAATACTTGACCAAGTTCAAATGGGATGA
TCTCACCGATGAAATTGCATACAAAAGTGCAATACGGGAACAGAAACTGAATATGGTTATGTCTGCTGCTAAAAGAGAGAAGGACT
TTTATTTATCTAAAGTAGAGAAGTCTCGTGCCATGACCGAGATTGATGAACGGATGAAGAAGAAGCGAAAGATTCAGGAAGAATCA
GGCAGCAACGCAGAACCAGCGCAAGTTTTCCCCCCTAGGGTGGTTCGTCAGTTCAGACAGAAGATAGCAATCAAAAATGAGGTGTT
TCAGAGCAAACCTGGTCTCTCCACAGATGTCCTAGCATCGGTTTTCGGCGGTTTTTAAAGATTAAGAAGAGGCATGTGAAGATATT
GCAGTTTGATCAAAGGCTTTATAATATGTATGAATGGCTTTTCCCATTAGTTTTTGCATGTCAACAGAGTGAACCTTCACATACAC
TTTTTTAGCTTTTTTGTTACTAAGAATATGAATTAAAACAAATTTTGATACTTTTTTT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002878090 hypothetical protein ARALYDRAFT_486092 [Arabidopsis lyrata subsp. lyrata] | 1132 | 2e-121 |
| NP_191210 RNA recognition motif-containing protein [Arabidopsis thaliana] | 1118 | 7e-120 |
| CAB88054 putative protein [Arabidopsis thaliana] | 1108 | 1e-118 |
| CBI15766 unnamed protein product [Vitis vinifera] | 894 | 7e-094 |
| XP_002284683 PREDICTED: hypothetical protein [Vitis vinifera] | 888 | 3e-093 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q6CFT1 Pre-rRNA-processing protein ESF2 | 435 | 5e-042 |
| Q6BSS5 Pre-rRNA-processing protein ESF2 | 424 | 9e-041 |
| Q59YL9 Pre-rRNA-processing protein ESF2 | 416 | 8e-040 |
| Q6CSP8 Pre-rRNA-processing protein ESF2 | 407 | 9e-039 |
| A3LVD5 Pre-rRNA-processing protein ESF2 | 393 | 4e-037 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q6NM71 At3g56510 | 1118 | 5e-120 |
| Q9LXY9 Putative uncharacterized protein T5P19_160 | 1108 | 7e-119 |
| A5BED4 Putative uncharacterized protein | 866 | 8e-091 |
| B9SJ78 Activator of basal transcription, putative | 760 | 2e-078 |
| B9GIL4 Predicted protein | 694 | 7e-071 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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