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Information for unigene UN16457
| FASTA Sequence |
| Unigene ID: UN16457 | Length: 760 |
SSR | | TTTTTTTCTTATGGAATATATTGATTACCATACTTCTTGAAAACATTTACAGATACAAAAGCAGAGTCATCATATAAAAACACCCA
GAGAGTTTGTTACATTGATACAACAAATTACAGTAAAGACATGGGGGATTGGTTTTCATCCCGAAGAACTAGCAGACCTTGCTGTT
TCAATTGCTGCAACTAGATCATCATATTTGGCACCCGTAACTTCCTTCACCACTTGGTTATCCTTTAATATTTTAAAAGTTGGAAC
CACTCTTATTCCTAGCTCCTTTGCCAATGGCCTGTTTTCAGGGTTGCAGTCAAGCTTAAGAAACACAACGTCCTCATATTTCTCAG
ATAAAGCTTTGTATTTAGGAGCAATCACTTTACATGGACCACACCATTGAGTGTACATGTCAAGTACCACAATCTTTTCACCAGCG
GCTTTAACGATGGGCCAGAAGGTATCCTTATCCACTTCCGTCACTTGACCAACACTAACATTCACAGTCTCTAAGCTACACCTCAC
CACAGAGGAGTCTCCCCTTCTCACAAAATCCAGTGAGCAGAAACCAATCCTCGTCGTCGTCGCCGTCGCCACGCCGGAGTAAGGGA
TACGACACTGCTTTTTCGCAGCTCCAAATCCACCGGTTGTCGGAGATAAAGCCGCAGGAGATGGAGCTAGACGGAGAGACAGAGGC
ATTGTTGAGTTCGGCGAAAGAGTGTCGGAACGATGAAATTGATCAGCTTGTGTGTGTGTGTGCCGTCTTCCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| O48897 RecName: Full=Thioredoxin F-type, chloroplastic; Short=Trx-F; Flags: Precursor | 872 | 1e-091 |
| XP_002884335 thioredoxin F-type 1 [Arabidopsis lyrata subsp. lyrata] | 824 | 4e-086 |
| NP_186922 thioredoxin F1 [Arabidopsis thaliana] | 823 | 6e-086 |
| AAD35003 thioredoxin f1 [Arabidopsis thaliana] | 818 | 2e-085 |
| NP_197144 thioredoxin F2 [Arabidopsis thaliana] | 699 | 1e-071 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| O48897 Thioredoxin F-type, chloroplastic | 872 | 5e-093 |
| Q9XFH8 Thioredoxin F1, chloroplastic | 839 | 4e-089 |
| Q9XFH9 Thioredoxin F2, chloroplastic | 699 | 6e-073 |
| P29450 Thioredoxin F-type, chloroplastic | 494 | 4e-049 |
| O81332 Thioredoxin F-type, chloroplastic | 467 | 5e-046 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B7FGW0 Putative uncharacterized protein | 527 | 8e-052 |
| C6SWF1 Putative uncharacterized protein | 510 | 8e-050 |
| C6SZV5 Putative uncharacterized protein | 510 | 8e-050 |
| A8VYL5 Chloroplast thioredoxin f | 506 | 2e-049 |
| A9PI12 Putative uncharacterized protein | 502 | 6e-049 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G02730.1 TRXF1 (THIOREDOXIN F-TYPE 1); enzyme activator | 839 | 3e-090 |
| AT5G16400.1 ATF2; enzyme activator | 699 | 6e-074 |
| AT5G42980.1 ATTRX3 (THIOREDOXIN 3); oxidoreductase, acting on sulfur group of donors, disulfide as acceptor | 175 | 3e-013 |
| AT5G39950.1 ATTRX2 (THIOREDOXIN 2); oxidoreductase, acting on sulfur group of donors, disulfide as acceptor | 175 | 3e-013 |
| AT3G51030.1 ATTRX1; oxidoreductase, acting on sulfur group of donors, disulfide as acceptor | 174 | 4e-013 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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