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Information for unigene UN16471

FASTA Sequence
Unigene ID: UN16471Length: 1196 SSR 
GGTGTTGAGCGCACCCCTGCGTTTACGGTGATCTCGAAGGTTCCAACCATCATCCTTGGGATGGATGTCTCACATGGATCTCCTGG
ACAGTCTGATGTCCCGTCCATTGCTGCTGTGGTGAGTTCAAGGCAGTGGCCTCTAGTCTCGAAATACAGAGCATCTGTTCGCACAC
AGCCTTCAAAAGCTGAGATGATTGAGTCACTGGTCAAGAAGAATGGAACAGAAGATGATGGCATAATCAAGGAGTTGCTGGTAGAT
TTCTACACCAGCTCGGGCAAGAGAAAGCCAGAGCATATCATAATCTTCAGGGATGGTGTTAGCGAATCTCAGTTCAACCAGGTTCT
GAACATTGAACTAGATCAGATCATTGAGGCCTGCAAGCTTCTAGATGAGAACTGGAATCCAAAGTTTCTGTTGTTGGTGGCTCAAA
AGAATCACCACACCAAGTTTTTCCAGACAAACTCTCCTGACAACGTTCCTCCAGGGACAATCATCGACAGCAAAATCTGTCACCCA
AAGAACAACGATTTCTATCTCTGTGCGCACGCTGGCATGATTGGAACAACACGTCCTACCCATTACCATGTCCTGTATGATGAGAT
CCATTTCTCACCTGATGAGCTTCAAGAGCTCGTCCACTCGCTCTCTTACGTGTACCAAAGAAGCACGACCGCCATCTCTGTTGTTG
CACCGATCTGCTATGCTCACTTGGCAGCTGCTCAGCTAGGAACGTTCATGAAGTTTGAAGATCAGTCAGAGACGTCCTCAAGCCAT
GGTGGCGTGACAGCTCCAGGACCAATCTCTGTTGCGCAGCTCCCTAAACTCAAAGACAACGTCGCCAATTCCATGTTCTTCTGTTA
GGTGTAGAAGAAGAAGAAGAAGTATCTATCTCTCTCTCTAATGTGCAGAAGTCTGTTTTCCACAACTTGGCTCTTTTTAAGTACTC
TAGTAATCGGCTTTTTTATCCTTAGGATCTCTCTCGGCTTTTTATAAGTGGTTTAAGGCAACTAAACGATAGACTTGGTATGTATT
TTGTGACTTTATTCGCCAGTCTTGTTGCCTGTAGGGGGCTTGAAATATACTTTTGCCCATCAACTCTTTAAGTTGCTTTAATTTCT
GGGATTACTAGACCCATTATTGCAAACTTATGTATGTGCTGACAATCTTCTAGTAAACAAACGCTAAGTGATAACCGT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002880875 hypothetical protein ARALYDRAFT_481584 [Arabidopsis lyrata subsp. lyrata]14484e-158
NP_565633 argonaute 4 [Arabidopsis thaliana]14271e-155
XP_002275928 PREDICTED: hypothetical protein [Vitis vinifera]12244e-132
ABC61504 AGO4-1 [Nicotiana benthamiana]12191e-131
ABC61505 AGO4-2 [Nicotiana benthamiana]12154e-131

Swiss-Prot top hits (Blast detail)Scoree value
Q0JF58 Protein argonaute 4B11954e-130
Q9SDG8 Protein argonaute 4A11685e-127
Q6YSJ5 Protein argonaute 169866e-106
Q5NBN9 Protein argonaute 158065e-085
Q851R2 Protein argonaute MEL16774e-070

TrEMBL top hits (Blast detail)Scoree value
Q9ZVD5 Argonaute (AGO1)-like protein14277e-156
Q2LFC2 AGO4-1 (Fragment)12191e-131
Q2LFC1 AGO4-2 (Fragment)12153e-131
D5FQ91 Argonaute 4-like protein12126e-131
B9SP45 Eukaryotic translation initiation factor 2c, putative12118e-131

Arabidopsis top hits (Blast detail)Scoree value
AT2G27040.1 AGO4 (ARGONAUTE 4); nucleic acid binding14283e-158
AT5G21150.1 PAZ domain-containing protein / piwi domain-containing protein11749e-129
AT2G32940.1 AGO6 (ARGONAUTE 6); nucleic acid binding8513e-091
AT1G48410.1 AGO1 (ARGONAUTE 1); endoribonuclease/ miRNA binding / protein binding / siRNA binding6326e-066
AT1G48410.2 AGO1 (ARGONAUTE 1); endoribonuclease/ miRNA binding / protein binding / siRNA binding6326e-066

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
101  20%
 
62  40%
 
92  40%

Unigene MembersMember information