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Information for unigene UN16480

FASTA Sequence
Unigene ID: UN16480Length: 763 SSR 
TCCAGAAGTAACGAAATAATCAAATATTAAAGACACTTCCCAAGCAGGGAAGTAACACATCATCAAATATAAAGAAAGCTTACACA
ACCAGAGTTCCGATCATCATCCAAGACATAAATATATTAAAAAAAAACATCAGATCACAACATTGACAAGAAAACAGATCTACTAA
TCTCAAATCTCATCTTCATCAACCTGATACTTCTTAATCAACTCAGAGCAAAACACATCGCTAACATCCTTCTCGAACCCCATGTT
GTTCGCATGCCTAATCTGCTCAGCGATACCATTGTAATGGTTCAATATCACGCGCGACTGCTCACGCCCCTTTGAGATTTTCGAAC
AACCCTTGTCCGAGCTTTTCACGAGCATCACATCGCACATCTCGTCTTTGTGGTCTTCGTGGACGACGAACATGTACTTCCCGTGA
CGGTTCGACACGGCCACGTCACTGTAGATCTCTTCCATCGTCTTCCTGTCTTTGCAAGAAAGCTTCACCGTCGCGCCGGGAAGGAC
GTAGGAGGATTCGGCAGTCTCGAAACCGAACTTGCATGTGTCGCAGTAAGTGATGCCTTGAACGACAAGAGTGTTCTTTCCGATGC
GTGGCTGCTTCCTCGCCGCCATGGCTATCGCCGGCAAGATGCAGAGGACCATCAAGATCACTAGTTTCGCCATTTTCGAGAAGAGA
GAGAGAGACTTAGAGAGAGGGTTGTGGATCGAAGTCAGGAGGAAGTAAAGTAAAGGTAGAAATTTAAGACACTCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_177927 pollen Ole e 1 allergen and extensin family protein [Arabidopsis thaliana]6901e-070
XP_002889170 pollen ole e 1 allergen and extensin family protein [Arabidopsis lyrata subsp. lyrata]6703e-068
AAF17689 F28K19.26 [Arabidopsis thaliana]6471e-065
AAN60344 unknown [Arabidopsis thaliana]6273e-063
XP_002887714 pollen ole e 1 allergen and extensin family protein [Arabidopsis lyrata subsp. lyrata]6013e-060

Swiss-Prot top hits (Blast detail)Scoree value
P13447 Anther-specific protein LAT522363e-019
Q8LGR0 Pollen allergen Che a 12302e-018
O49813 Olee1-like protein2302e-018
Q7M1X5 Major pollen allergen Lol p 112131e-016
P19963 Major pollen allergen2032e-015

TrEMBL top hits (Blast detail)Scoree value
Q8LD45 Allergen, putative6901e-070
Q9SGZ6 F28K19.266471e-065
Q8H789 Putative uncharacterized protein (Fragment)6272e-063
Q42043 Pollen specific protein (Fragment)5124e-050
Q9SZY5 Allergen-like protein BRSn203898e-036

Arabidopsis top hits (Blast detail)Scoree value
AT1G78040.1 pollen Ole e 1 allergen and extensin family protein6952e-073
AT1G78040.2 pollen Ole e 1 allergen and extensin family protein6952e-073
AT4G08685.1 SAH73932e-038
AT5G10130.1 pollen Ole e 1 allergen and extensin family protein2588e-023
AT4G18596.1 pollen Ole e 1 allergen and extensin family protein2004e-016

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
812  80%
 
71  7%
 
102  13%

Unigene MembersMember information