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Information for unigene UN16498

FASTA Sequence
Unigene ID: UN16498Length: 489 SSR 
AAAAGCTCAAATTTAATATGGTTGTATAAAATTTGGTTAAACCCCCGAATAAAACCCCCACAAAGCAAATATTTGAGAGACTAAAA
GGGTTTATTAACCAACACAGCTTCCATTACAAGTAAAAAAAAACAATGCTTCGAGATTTATATATCAACCTGGAAAACTCAAATGA
TGATGATGATGATGAGAGAAACGTAAACCCTCTCTAATCCTTCTTCTTGAAGGCTCCTTTGGGGATTTTGCTCATGACCTTACTCA
AAACCTTCTCATCAAGCACTGCGTACTGCTTCTTGGTCTCCTTCATTGCCTTTTCAGCAAAGTCATCTACTTTATCATCATACTTT
TCGTAAAGCACGGGAACGGTGAAAAAAAAAACAGTTGCGATATAAATCAAGGTCAAAAAGTTGCATGAGCTACCAACTTTGGACAA
AACCCACAAGCCAGCAACAACCATAACTTCTTGAAATCTCTCCCTAATGCGATGTTCCT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_176592 reticulon-like protein B3 [Arabidopsis thaliana]3481e-031
BAH57206 AT1G64090 [Arabidopsis thaliana]3481e-031
NP_001185307 reticulon-like protein B3 [Arabidopsis thaliana]3481e-031
XP_002887921 reticulon family protein [Arabidopsis lyrata subsp. lyrata]3472e-031
XP_002870630 VIRB2-interacting protein 3 [Arabidopsis lyrata subsp. lyrata]3283e-029

Swiss-Prot top hits (Blast detail)Scoree value
Q9SH59 Reticulon-like protein B33481e-032
Q9FFS0 Reticulon-like protein B43112e-028
Q9SUR3 Reticulon-like protein B12413e-020
O82352 Reticulon-like protein B52404e-020
Q9SUT9 Reticulon-like protein B22379e-020

TrEMBL top hits (Blast detail)Scoree value
C0Z3C7 AT1G64090 protein3489e-032
B7FIA7 Putative uncharacterized protein2629e-022
B9GQE4 Predicted protein2601e-021
B9GX32 Predicted protein2592e-021
B3TLN1 24 kDa seed maturation protein2582e-021

Arabidopsis top hits (Blast detail)Scoree value
AT1G64090.1 reticulon family protein (RTNLB3)3491e-033
AT5G41600.1 BTI3 (VIRB2-INTERACTING PROTEIN 3)3113e-029
AT4G23630.1 BTI1 (VIRB2-INTERACTING PROTEIN 1)2469e-022
AT4G11220.1 BTI2 (VIRB2-INTERACTING PROTEIN 2)2413e-021
AT2G46170.1 reticulon family protein (RTNLB5)2404e-021

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
61  50%
 
81  50%

Unigene MembersMember information