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Information for unigene UN16502

FASTA Sequence
Unigene ID: UN16502Length: 458 SSR 
GTGGAAAAATAATTGATACATTATTGATATTAAGATGAGTAAAATTCAACAACGATACATGGAGAGAGAGAGAGAGAGAGAGAGAC
CAAACTCAATATAAATCAATTACAAGAATTCAAAGAGACACAAACAATACATGACTTAGACATAGATTAATTGATTTATTTAATTC
AGTTAAAAATAAGAAGAAAAAACATAAAACTTATTAAAAGAGTAATCCAAATGTCAGAACGGCGACGGAGGCAAAGAAAGTAGGGA
TAAACGAGGAGGCATCGGAGGAGGGGCTCGGGGCCGGAGCGTCAACCGCTGCAGCCGAATGTTGAACCGCAGAGAACGCTATCATC
GCAACCAGAACCGCCACAAAAAGCTTCATCTTCATTGCCTCCATTGTTAGTATTCTTTTTAATATGATAGAGAAGGTTTGGTGTTT
ATTGTTGTTCTTGATTTTGAGGTGTCCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002864463 hypothetical protein ARALYDRAFT_918807 [Arabidopsis lyrata subsp. lyrata]2494e-020
NP_200465 arabinogalactan protein 14 [Arabidopsis thaliana]2333e-018
NP_194362 arabinogalactan protein 13 [Arabidopsis thaliana]2111e-015
XP_002867569 hypothetical protein ARALYDRAFT_492181 [Arabidopsis lyrata subsp. lyrata]2039e-015
XP_002297629 predicted protein [Populus trichocarpa]1903e-013

Swiss-Prot top hits (Blast detail)Scoree value
Q9LVC0 Arabinogalactan peptide 142332e-019
Q9STQ3 Arabinogalactan peptide 132118e-017
Q9LJD9 Arabinogalactan peptide 121866e-014
Q9C8A4 Arabinogalactan peptide 211671e-011

TrEMBL top hits (Blast detail)Scoree value
A9PBQ1 Predicted protein1955e-014
B9IPQ7 Predicted protein1794e-012
A9P890 Predicted protein1642e-010
B9GY63 Predicted protein1606e-010
Q2V609 Putative uncharacterized protein1491e-008

Arabidopsis top hits (Blast detail)Scoree value
AT5G56540.1 AGP14 (ARABINOGALACTAN PROTEIN 14)2342e-020
AT4G26320.1 AGP13 (arabinogalactan protein 13)2127e-018
AT3G13520.1 AGP12 (ARABINOGALACTAN PROTEIN 12)1875e-015
AT1G55330.1 AGP211689e-013

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
61  50%
 
111  50%

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