Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN16515

FASTA Sequence
Unigene ID: UN16515Length: 1334 SSR 
GGGAGAAAAGCCAATGCAAGAGGAAGGAGAAGAAAGCTAAACCTCTCTCTCTATCTCTGTTCATGGCGCTTTCAGGAACTTTGCAG
CTTACTTCTAATTACATTCCTGGTTATGGAGTTTCAGAGAGCAGGAGCTTCTCTAACTCTGTTGTGTCTAGAAAATCACTTGATGT
ATTACCTTTCTCTTCCTGTCTGGTTCGCATCGAGAATGGAGGATATGCCGCCCCTAAGAGAATTTCATTTGTGTGCGGAGCAAGTT
CTTCTGGCCATAGGAGAAACAATCCTGATTTCTCAAGAAACAATAGGAATGGTTTCAGAGGTAATAGGAATAGGAGGAACGAAGAT
AGAGACGGTTTAGACGGTGGTGGTGGTGGTCTTGAAGACTCTGAGATGCTGTCTTCCAAGAGCGGTCCTGTGTTCTCTCTATCTAG
TTCCCCGAAGTTCCAGGCGACTTCATCACCTGGACCAAGAGAGAAAGAGATAGTTGATCTTTTCAGGAAAGTCCAAGCTCAGCTCC
GAGCTCGAGCTGCTGCTAAGAAAGAAGATAAGAAGACTGAAGAAGCTTCTAAAGGACAGGGAGGCAAAGAGACTGAGACTGTGGAC
TCTCTTCTTAAGTTACTGAGGAAGCACTCAGGAGAACAGAGCAAGAAGAACGTTAGCAACTTTGATTCTGAAAAGCAGCTACAAGG
AGATGATGATGATGATGATGATGCTGAAAGACAGGTTCACAGTTCCAATCATTTTGATTCGCGAAACAGGGATCATAATGCAACAC
GTTTTACAAGGCCAGCCTCAAGCTTCAGGCGCAATTCACCTGTACCGAGACATAAACCTCAGTCCAGTTACTCTAGTGAGGCCATT
TTCGATGAGGCGTCAAGTTACAGTGTGACTTGGACTCAGAAAAAGGATCAAGTAGATTCACGTGATGAACCTGAATACGAGCCCGA
GCCTGTTTATGAACCTGAATCTGAACCAGGACTTGGCCTTCTCGAATCAGAGCCAGAGCTAAAACCAGAGTCATTTTACCATGAGG
AGGATGAGGATCATGATGTCATTGTAGATGAATTAGCAGTTGATGATGAGTCTATCAATGCTGAGGAAGAAACTGAGAAAGATGAA
GACTTGAGTGCACTGAAGTTGATAGAACTTAGAGCCATAGCAAAATCAAGGGGTCTTAAAGGGATTTCAAAGATGAAGAAAGCAGA
GCTGTTGAATTTGCTGTGTAGTAATAAAGCATGATGATAGGAATGAACAAGAACACTGTTTTAGTTTTTCTGATACAGCAAATGAA
TCTCCAAATATTTGTTTCATTCATAATTTTAGTGCATTCTGACC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002879308 hypothetical protein ARALYDRAFT_320865 [Arabidopsis lyrata subsp. lyrata]13383e-145
XP_002862788 hypothetical protein ARALYDRAFT_920271 [Arabidopsis lyrata subsp. lyrata]12138e-131
NP_563761 Rho termination factor [Arabidopsis thaliana]10864e-116
XP_002892326 ATP binding protein [Arabidopsis lyrata subsp. lyrata]10864e-116
AAF80216 Contains a weak similarity to an unknown protein T16B12.4 gi|3746061 from Arabidopsis thaliana BAC T16B12 gb|AC005311. ESTs gb|AI999279, gb|Z30507, gb|AI997722, gb|Z26742 come from this gene10821e-115

Swiss-Prot top hits (Blast detail)Scoree value
Q8L4E7 SAP-like protein BP-734572e-044
Q75JC9 Uncharacterized protein DDB_G02716701247e-006

TrEMBL top hits (Blast detail)Scoree value
Q94K75 Putative uncharacterized protein At1g0619010863e-116
Q9LNC8 F9P14.5 protein10829e-116
Q8LFT8 Putative uncharacterized protein10666e-114
A8MQM6 Uncharacterized protein At1g06190.28507e-089
Q3EBR1 Putative uncharacterized protein At2g31150.17172e-073

Arabidopsis top hits (Blast detail)Scoree value
AT1G06190.1 ATP binding / ATPase, coupled to transmembrane movement of ions, phosphorylative mechanism11131e-121
AT2G31150.1 ATP binding / ATPase, coupled to transmembrane movement of ions, phosphorylative mechanism9615e-104
AT1G06190.2 ATP binding / ATPase, coupled to transmembrane movement of ions, phosphorylative mechanism8764e-094

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
81  33%
 
71  33%
 
121  33%

Unigene MembersMember information