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Information for unigene UN16515
| FASTA Sequence |
| Unigene ID: UN16515 | Length: 1334 |
SSR | | GGGAGAAAAGCCAATGCAAGAGGAAGGAGAAGAAAGCTAAACCTCTCTCTCTATCTCTGTTCATGGCGCTTTCAGGAACTTTGCAG
CTTACTTCTAATTACATTCCTGGTTATGGAGTTTCAGAGAGCAGGAGCTTCTCTAACTCTGTTGTGTCTAGAAAATCACTTGATGT
ATTACCTTTCTCTTCCTGTCTGGTTCGCATCGAGAATGGAGGATATGCCGCCCCTAAGAGAATTTCATTTGTGTGCGGAGCAAGTT
CTTCTGGCCATAGGAGAAACAATCCTGATTTCTCAAGAAACAATAGGAATGGTTTCAGAGGTAATAGGAATAGGAGGAACGAAGAT
AGAGACGGTTTAGACGGTGGTGGTGGTGGTCTTGAAGACTCTGAGATGCTGTCTTCCAAGAGCGGTCCTGTGTTCTCTCTATCTAG
TTCCCCGAAGTTCCAGGCGACTTCATCACCTGGACCAAGAGAGAAAGAGATAGTTGATCTTTTCAGGAAAGTCCAAGCTCAGCTCC
GAGCTCGAGCTGCTGCTAAGAAAGAAGATAAGAAGACTGAAGAAGCTTCTAAAGGACAGGGAGGCAAAGAGACTGAGACTGTGGAC
TCTCTTCTTAAGTTACTGAGGAAGCACTCAGGAGAACAGAGCAAGAAGAACGTTAGCAACTTTGATTCTGAAAAGCAGCTACAAGG
AGATGATGATGATGATGATGATGCTGAAAGACAGGTTCACAGTTCCAATCATTTTGATTCGCGAAACAGGGATCATAATGCAACAC
GTTTTACAAGGCCAGCCTCAAGCTTCAGGCGCAATTCACCTGTACCGAGACATAAACCTCAGTCCAGTTACTCTAGTGAGGCCATT
TTCGATGAGGCGTCAAGTTACAGTGTGACTTGGACTCAGAAAAAGGATCAAGTAGATTCACGTGATGAACCTGAATACGAGCCCGA
GCCTGTTTATGAACCTGAATCTGAACCAGGACTTGGCCTTCTCGAATCAGAGCCAGAGCTAAAACCAGAGTCATTTTACCATGAGG
AGGATGAGGATCATGATGTCATTGTAGATGAATTAGCAGTTGATGATGAGTCTATCAATGCTGAGGAAGAAACTGAGAAAGATGAA
GACTTGAGTGCACTGAAGTTGATAGAACTTAGAGCCATAGCAAAATCAAGGGGTCTTAAAGGGATTTCAAAGATGAAGAAAGCAGA
GCTGTTGAATTTGCTGTGTAGTAATAAAGCATGATGATAGGAATGAACAAGAACACTGTTTTAGTTTTTCTGATACAGCAAATGAA
TCTCCAAATATTTGTTTCATTCATAATTTTAGTGCATTCTGACC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002879308 hypothetical protein ARALYDRAFT_320865 [Arabidopsis lyrata subsp. lyrata] | 1338 | 3e-145 |
| XP_002862788 hypothetical protein ARALYDRAFT_920271 [Arabidopsis lyrata subsp. lyrata] | 1213 | 8e-131 |
| NP_563761 Rho termination factor [Arabidopsis thaliana] | 1086 | 4e-116 |
| XP_002892326 ATP binding protein [Arabidopsis lyrata subsp. lyrata] | 1086 | 4e-116 |
| AAF80216 Contains a weak similarity to an unknown protein T16B12.4 gi|3746061 from Arabidopsis thaliana BAC T16B12 gb|AC005311. ESTs gb|AI999279, gb|Z30507, gb|AI997722, gb|Z26742 come from this gene | 1082 | 1e-115 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q8L4E7 SAP-like protein BP-73 | 457 | 2e-044 |
| Q75JC9 Uncharacterized protein DDB_G0271670 | 124 | 7e-006 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q94K75 Putative uncharacterized protein At1g06190 | 1086 | 3e-116 |
| Q9LNC8 F9P14.5 protein | 1082 | 9e-116 |
| Q8LFT8 Putative uncharacterized protein | 1066 | 6e-114 |
| A8MQM6 Uncharacterized protein At1g06190.2 | 850 | 7e-089 |
| Q3EBR1 Putative uncharacterized protein At2g31150.1 | 717 | 2e-073 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G06190.1 ATP binding / ATPase, coupled to transmembrane movement of ions, phosphorylative mechanism | 1113 | 1e-121 |
| AT2G31150.1 ATP binding / ATPase, coupled to transmembrane movement of ions, phosphorylative mechanism | 961 | 5e-104 |
| AT1G06190.2 ATP binding / ATPase, coupled to transmembrane movement of ions, phosphorylative mechanism | 876 | 4e-094 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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