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Information for unigene UN16540
| FASTA Sequence |
| Unigene ID: UN16540 | Length: 1700 |
| SNP | GCAAGAATAGAAAAGTAGAAATTTCATTGCCAATGATCAGGGGAGATCCCCTCAACAATCAGAATACAAATCATTGCCGGAAAGAC
AAAAGGGAAAAACAAAGACAACAAGGGATTGAAACAACAAAGCAAGAGGAACATAAAACCGCTCCTAAATCCAAATGATATTAAGA
ATCAAAAGAGTTTTTTGTTATTCATCAAACACTGGAACCCTTATCTTCAAGCTCTTTTAATGGTTCCCACATCTTTTCTCTCTTCC
TTCATTACTCTTCAGCAAGAGGAACAGCCTTAGCCAGTGGGCGATACTTCAAGGCATAGAACATCTCAAGGTAACGACGGCTCTCA
AGACGGTCAAGGTTCGAGACATGCTTCCAGAATCCATACACACCGGTCAATGTCAGGAGCCTCTGTGAGTAAATCTGCCATGTGTA
TTTCTCCTCAATCCTCTGAAGCCCTCCCTTTGAGATCTGGTCCCAGTGAGATGGATCTTCCTTACATTTGGTGAAGAAATCAGCAA
GAGTATCAGCAGCCTGATCACCGTGGTAAGGGTCAATGTGGAAACCCGATTTGCCGTGCACAATGATCTCAGCTGGACCACCTTTG
CATGTGGCGAACGTTGGTAAACCACAGGTCATGGCCTCCACAACAGTCAGACCAAAGGCTTCATACAGTGCTGGTTGCACAAAAGC
ACCTTTTGTGTCACAGATGTACCTGTAGAGCTCACCGTTCCTAACTCTGTTCATCTGGGATGAGATCCACCTGAACTGGCCGTTGA
GCTTGTATTCATCAATGAGGTCATACATTTTCTTCATCTCGGCCTTCTCTTCGTTGTCCTTTGACTCTTTCCTCCTGTCTCCTCCA
ACAACCACCAGGTTAGCAAGCTCACGCAGGCGTTTGTTCTTCCCGTACCACTCAACAAGACCTGACAAGTTCTTGACACGGTCGAG
TCTAGCCATCGTGAAGAGGATTGGCTTCTTCTTGTCCTTGAGCACACATAAGTGCTCTTCGTTTTCAACATTGCTGTAGAGGAGCT
CCTCAATCTCAGGGTGGAATTTAGTCAATCTACGCTTCTCCTCTGTGTAAGGGAAGTAGATGCTCATATCAGCACCAGGAGAGACA
ATGTTGAACTTGGGATCAAACACATCGATCCCGTGAACAACACGGTACAGTCCAGGAAGAGTAAAGGCTGTGTGGCTCTCATACTG
TCGAACCGTATCCTTGCTTCCAGCAATTTCTTGGAGAGTACTAGTGATGATGAAATCAGTGTGGTTCATTGCAAATAAATCCGCAG
TGAACTGGCATGAGAAATGGTACTTATCGTCAAGTTTCTTCCAGTAGATATCAGAATCAGGGTACTTTGTCTTCTCCAGGGCGTGA
GCAATGGTACACTGAGTGACACCAAGTTTGTGTGCCAACAAAGAGGCAACGAGGTTTCCATCACTGTAGTTACCAATGATAAGATC
AGGCTTGCCCTTCAACTCTTTGGCAAGCTCAGCGGCAGCATCCTCGGTGTAAGTCTCTAGATATGGCCAGACTTCGAATCTTGAGA
TCCATTTGCGAACAATACCCTTCTCTGTTCTGAAGGGTACACGGAGAATATCACAGTACTCAGATCCATCAACTCTCTCAAGACGC
TCACCGCATGTGGTTCCTACTGCATCAGGGAGCAGTCTAGTAAGAATGAGAATTCTTGGAGTGATC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_197583 sucrose synthase 1 [Arabidopsis thaliana] | 2442 | 4e-273 |
| 3S28 Chain A, The Crystal Structure Of Sucrose Synthase-1 In Complex With A Breakdown Product Of The Udp-Glucose | 2442 | 4e-273 |
| XP_002874016 hypothetical protein ARALYDRAFT_910122 [Arabidopsis lyrata subsp. lyrata] | 2441 | 5e-273 |
| 3S27 Chain A, The Crystal Structure Of Sucrose Synthase-1 From Arabidopsis Thaliana And Its Functional Implications. | 2394 | 1e-267 |
| XP_002877269 hypothetical protein ARALYDRAFT_484788 [Arabidopsis lyrata subsp. lyrata] | 2374 | 3e-265 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| P49040 Sucrose synthase 1 | 2442 | 1e-274 |
| P13708 Sucrose synthase | 2268 | 2e-254 |
| P31926 Sucrose synthase | 2242 | 2e-251 |
| Q01390 Sucrose synthase | 2235 | 1e-250 |
| O65026 Sucrose synthase | 2219 | 1e-248 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q94CC8 Putative sucrose synthase | 2373 | 2e-265 |
| Q9LXL5 Sucrose synthase-like protein | 2373 | 2e-265 |
| Q9SLS2 Sucrose synthase | 2311 | 4e-258 |
| C8YQV0 Sucrose synthase 1 | 2310 | 5e-258 |
| Q9SLY1 Sucrose synthase | 2298 | 1e-256 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G20830.1 SUS1 (SUCROSE SYNTHASE 1); UDP-glycosyltransferase/ sucrose synthase | 2442 | 1e-275 |
| AT5G20830.2 SUS1 (SUCROSE SYNTHASE 1); UDP-glycosyltransferase/ sucrose synthase | 2442 | 1e-275 |
| AT3G43190.1 SUS4; UDP-glycosyltransferase/ sucrose synthase/ transferase, transferring glycosyl groups | 2373 | 1e-267 |
| AT4G02280.1 SUS3 (sucrose synthase 3); UDP-glycosyltransferase/ sucrose synthase/ transferase, transferring glycosyl groups | 1903 | 4e-213 |
| AT5G49190.1 SUS2 (SUCROSE SYNTHASE 2); UDP-glycosyltransferase/ sucrose synthase/ transferase, transferring glycosyl groups | 1869 | 4e-209 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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