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Information for unigene UN16541

FASTA Sequence
Unigene ID: UN16541Length: 1473 SSRSNP
GGGCAAAATTGGCCGCTTCTGAGTTTAGAACCCAAAAAGGATAATATAAAAAGGGATTTAAACCTAAAGCCCCGAGAAACAAACCA
AAACGGGGCCGCCTGAAAGAGAGCAATAATGGCGAAAGGCGACGATGCTTTGGCGAGGAAGAAGAACAAATCCAACCGGAAGAAGA
TGAATCGCAAGAACGATTCCGCCGCCGTATCCTCTCGCATCGCCGCTATCATCGCCGCCAAGAAGCGCCGCCAGACTGGCAAACGC
AGCATGTGTCAGGGAATGTGTTTTAGCCTTCCTACACCAGAAGATCCCTTCAATGAGAAGCTGGGTAAAGTGAGCATTGTCAAAGA
GAAGAAGAAGAAGAAAAAGGTCAAGTCTAGAGATGCTCTTTCAGTGAATAAATCTTCTCTTAAGAAACCATCTCGAGACGGCGATG
AGAAGAAGACGGAGAAGATGAGGGTGATTCATGGTCCACGTAAGTTGGTGATGCTCTGCCTGACCGAAATCGAGAGCTCCTTTCAT
CACCTTGAGAAGCCTTTGTTCACTAGCACTTGGGGGAATGAGTTCTGGAAATCTTTTCATTCTGGTAAAGATGTTGTTGAGACTAG
TGTGACATCTTCCTCCCTTGAACAAATCGCATGGATCGTTTCGACTGCCACTGATGCTATTTCTATGCGAGAGAAATACGAGGAGA
GCCTACCACTAAGCAGTAGTCCTTTTCTCTTATATCTCGTACCATCTCAGTCCAAAGCTTCAGAGGTTCGATCGGTTTGCAAGGCG
CTGAAACGTCTTGGAGTTCATGCAGTGAGCTTACACAATGGAGCCGAAATAGATCATCAGATTTCTGGATTGAAAAGCTTAGAACC
TGAATTTATAGTTTCCACACCTGAGCGACTTTTGGAGATTGTTGCCCTCAAAGGAGTTGATATATCGGGGGTTTCGTTACTGGTCA
TTGATGAACTAGGTTCACTTTGCGCTAGTGGTTATCTAGATGCGGTGAAATCCATTAAGAAGGCCATCACCAGCGAGCACCGATCA
GTAGTTTTCAACGACAGTGCTTCCTGTACTCCAGCCGTCCTGAGTCTTTTGGGGAGATTCTGACAAGTATTGCTAAAGAGAGTGTT
TACGGTGTGCTACACAGCTTTGTAACAGAAAAAGAGGAGGATGTGTTTTGTCTTGCTGGTTCATTGGTGAATGTTCTGGAGGATTG
TGGCCAGGACGTGCCTGGCTGTTGGAGGAATATGTCTAATTGATCAAACTTGTTGTTTCTCAATACTCTTTTAAGTTACAATTTTA
GTTTTTGCTTACTGAAAGTTTTAGCTGCAGGGAATTTTGGTTAAAGTGATATAAATTTTGAGTAATTGATGTTTCTTTTTTTCCTT
CTGATCATTTTCTTGTCCGGTCCAATGATATGTTTAAAGTTGTTTGATTTTGAGTTCGCATCAAGTTCAATAAGAGACACTCGAGT
CTTAATCAGCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002879168 ATP binding protein [Arabidopsis lyrata subsp. lyrata]10704e-114
AAM13871 putative ATP-dependent RNA helicase [Arabidopsis thaliana]10014e-106
NP_180427 P-loop containing nucleoside triphosphate hydrolase-like protein [Arabidopsis thaliana]9971e-105
XP_002268889 PREDICTED: hypothetical protein isoform 1 [Vitis vinifera]8562e-089
XP_002530895 dead box ATP-dependent RNA helicase, putative [Ricinus communis]7829e-081

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q8RWX0 Putative ATP-dependent RNA helicase (Fragment)10489e-112
Q9SIB5 Putative ATP-dependent RNA helicase10183e-108
B9SY26 Dead box ATP-dependent RNA helicase, putative7826e-081
B9HUY8 Predicted protein7485e-077
Q2QXQ5 ATP-dependent RNA helicase, putative, expressed4663e-044

Arabidopsis top hits (Blast detail)Scoree value
AT2G28600.1 ATP binding / ATP-dependent helicase/ nucleic acid binding10181e-110

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
64  50%
 
82  25%
 
122  25%

Unigene MembersMember information