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Information for unigene UN16551

FASTA Sequence
Unigene ID: UN16551Length: 1477  SNP
GGGGCAATACAAAGGGTTAGCTGACCTTCTCTTCTCTTCTTCCTCCTACGACCTGTCATCATCCGTCCAAAAGCTTTCGTGAGTCT
GTACCATCCTTCTCTAATGTCCGTAAACGTCAAGGAGGAGCCTGTGCTTGCGCCTAACTGCGATGTCATCGAGAACACAGAGGTTG
AAGTTGTCAATGGAGATGAGGGAAGTAAGCTTGAGGATTATGGGACTTGCGTAGATGTTATTACCGAGAGAGTCAATCAGCTTGAG
CAGAAAGTTGTGGAGGTTGAACAGTTTTACTCTACCAAAGACGGAGCAGGTCAAACAAACACTTCCAAGAGTAACTCCGGTGGGAA
AAAAGTTGCTATCTCTCAACCCTCCAAGTGTAGCTCTGCTGGGAAAGGAATAACAAGAGGGAAACATGTTTCTAGCCCTGAACTTA
TGCGTCAGTTTGCTACAATTTTTCGTCAGATTGCTCAACAAAAATGGGCGTGGCCATTTCTGCAACCTGTTGATGTTAAAGGGCTT
GGACTCGATGATTATCACAAGGTTATAGAGAAGCCAATGGATTTGGGAACTATTAGAACTAAAATGGAGGCTTCGGAGTACAGCAA
TGTCCGGGAGATATATGCTGATGTTAGGCTAGTTTTCAAGAACGCTATGAGATATAACGAAGAGAAAGATGATGTCTATGTGATGG
CTGAATCTCTTTTGGAGAAGTTTGAGGAGAAGTGGCTTACCATTATGCCTAGACTCGTCGAAGAGGAAAAAAAACAAGCAGAGGAA
GAGGCTCAGGATCGTGCGAGTAGGCAGCTTGCTGTGGAGGCTGCTCAAGCAGAGAAGGCTAGAGATTTAAGCAACGAACTGTATGA
GATCGATCAGGAGCTTGAGAAACTTCGGGAGGTAGTGGTCCAGAAGTGCAGAAAGCTGTCCACTCAAGAAAAGAAGGGACTTTCTG
CAGCTTTAGGTCGTCTCTCTCCTGAGGATCTGTCTAAGGCTCTGAAAATGGTTTCAGAGGGCAACCCGCAGTTCCCGGCCGGAGCA
CCAGAAGTGGAGCTTGACATCGATCTTCAGACTGATGTAACTTTGTGGAGGCTGAAGGTGTTTGTGCAAGAAGCATTGAAAGCAGC
TAACAAGAGCTCTGGTGGAACAAACGCCCAAAACAACAACAATGGTGGAGAGATGAACAAGACCACTGCGAAAAGAAGGAGAGCGA
TCTTTGATGCAATTAAAAAGGGCCATCAGTAGCAGCAGCTATGACGAGGAAGAGGATAGGAAGGAAGCTAAGACTTTGGGAGAAAG
AGAGGATCTGACAGTCACAGTAAAGCTACTCTATTAATAAAGAGAGAGTGAGTGAAAGAGATCTTTATCGATGTATTAGCTTATTT
TTATTGTGAGAGATACAGTGAATTGTGTGTGTTATTGGATCAATCTAGAGTTGGTTCCTAACATTAAACTAATCCATTATGCTTTG
CTTATTTTGTGATTC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_181036 Transcription factor GTE6 [Arabidopsis thaliana]15722e-172
XP_002881364 imbibition-inducible 1 [Arabidopsis lyrata subsp. lyrata]15642e-171
BAD95432 RING3 protein-like [Arabidopsis thaliana]15606e-171
NP_973602 Transcription factor GTE6 [Arabidopsis thaliana]11628e-125
AAC12830 putative RING3 protein [Arabidopsis thaliana]11198e-120

Swiss-Prot top hits (Blast detail)Scoree value
Q9FT54 Transcription factor GTE67117e-074
Q15059 Bromodomain-containing protein 32511e-020
Q8K2F0 Bromodomain-containing protein 32492e-020
P13709 Homeotic protein female sterile2368e-019
Q5TJG6 Bromodomain-containing protein 22322e-018

TrEMBL top hits (Blast detail)Scoree value
Q84XV2 At2g3490015722e-172
Q56W05 RING3 protein-like15604e-171
O64754 Putative RING3 protein15471e-169
Q3EBN0 Putative uncharacterized protein At2g34900.211625e-125
B9HLP1 Global transcription factor group9162e-096

Arabidopsis top hits (Blast detail)Scoree value
AT2G34900.1 IMB1 (IMBIBITION-INDUCIBLE 1); DNA binding15728e-175
AT2G34900.2 IMB1 (IMBIBITION-INDUCIBLE 1); DNA binding11623e-127
AT3G52280.1 GTE6 (GENERAL TRANSCRIPTION FACTOR GROUP E6); DNA binding / H3/H4 histone acetyltransferase7116e-075
AT5G10550.1 GTE2 (Global transcription factor group E 2); DNA binding2672e-023
AT1G06230.1 GTE4 (GLOBAL TRANSCRIPTION FACTOR GROUP E 4); DNA binding2619e-023

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
116  43%
 
92  14%
 
101  7%
 
72  14%
 
63  21%

Unigene MembersMember information