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Information for unigene UN16554

FASTA Sequence
Unigene ID: UN16554Length: 642 SSR 
GGCGACCAAAAACACACAGCCAAAAACCAGATAATAACATGAGATCTCTCTTCATACTAGCCTTGTTCCTACTTCTTGCTTTTCAC
CATGGTGAAGCAGCCGTGACTTGCAACAACGTGGTTAGTGATCTTTACCCTTGCCTCTCCTACGTGATGCAAGGCGGAAAAGTCCC
ACCAGCTAACTGCTGCAGCGGTGTCAGAACGCTCAACATTCAGGCTCAAACCTCTGTGGACCGTCGGAGCGTGTGCCGTTGCATCA
AAAATGCGATTGGAGGAGCCTCTTACTCGTCTAGCAACCTCAACAATGCTCTGTCTTTGCCTGCTAAGTGTGGTGTTAATCTCCCT
TTCAGGATCAGCCCTTCCACCAACTGCGACAGGTAAAAAAAACACGTCCGTAAAATGATTTATATATTAGGACATGAAAACAATAA
TCTCAACCACTTATATCTTTCTTTTTACAGTATCAATTGAGATAAGCAGAAGATCCTAAAGGAAGCTACTACTACTACTATTACTG
CAAGAACTTAAAACATATGGCTTGGTAGTAACTATGCTGATCAGTTGATGTATCTTCACGTCTATTTTCTTCAAAGTTCTAATAAA
AATTATCAACATGCTATGATATCAGACCAAAAATATAATC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002884695 hypothetical protein ARALYDRAFT_478179 [Arabidopsis lyrata subsp. lyrata]3871e-035
NP_187489 non-specific lipid-transfer protein 6 [Arabidopsis thaliana]3728e-034
NP_001189842 non-specific lipid-transfer protein 6 [Arabidopsis thaliana]3728e-034
XP_002872988 predicted protein [Arabidopsis lyrata subsp. lyrata]3314e-029
ACU13784 unknown [Glycine max]3011e-025

Swiss-Prot top hits (Blast detail)Scoree value
Q9LDB4 Non-specific lipid-transfer protein 63733e-035
Q9LZV9 Non-specific lipid-transfer protein 103008e-027
Q43019 Non-specific lipid-transfer protein 32765e-024
P19656 Non-specific lipid-transfer protein2721e-023
Q43194 Non-specific lipid-transfer protein 22632e-022

TrEMBL top hits (Blast detail)Scoree value
C6SX11 Non-specific lipid-transfer protein3019e-026
C6SVW1 Non-specific lipid-transfer protein2911e-024
C6TNW2 Non-specific lipid-transfer protein2892e-024
Q2XX16 Non-specific lipid-transfer protein2821e-023
Q2XX15 Non-specific lipid-transfer protein2812e-023

Arabidopsis top hits (Blast detail)Scoree value
AT3G08770.1 LTP6; lipid binding3733e-036
AT5G01870.1 lipid transfer protein, putative3008e-028
AT5G59310.1 LTP4 (LIPID TRANSFER PROTEIN 4); lipid binding2471e-021
AT2G38540.1 LP1; calmodulin binding2362e-020
AT5G59320.1 LTP3 (LIPID TRANSFER PROTEIN 3); lipid binding2362e-020

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
121  33%
 
191  33%
 
111  33%

Unigene MembersMember information