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Information for unigene UN16578
| FASTA Sequence |
| Unigene ID: UN16578 | Length: 1191 |
| SNP | AAACAAAGATCAATGTCGTGCATTTCTTATTTTTGAAATCTTAACAAAATGCTCTTGAAACAATTTGGGTTTTAAAAAAAAACCCA
TAAGCAAGAAAGACAACGGTTTCCACGAATACAAAAACCTCAATTGCTCTTCCTAGCAAGCTTAGTCCACTCCGTGTGGTACGCAC
CAGAACGATCAATCCTCTCGTAAGTATGAGCTCCAAACAGATCTCTCTGCGCCTGCACCAGATTCGCCGGCAATCTCGCACGCCTA
TACGTATCAAAATACGCAAGACTCGCACACATTCCAGGGGTGCTAATCCCAGCAGAGACAGCCAAACCCACGACTCTCCTCCAAGC
AGCTTGTCTCTGAACCATCTCTTTAGCAAACTCAGGATCAACCACAAGGCTCGCCAAATCCGGATTCCTCTGGTAAGCTTTCTTGA
TCCTATCCAAGAACACCGCTCTTATGATACACCCACCTTTCCAAATCCTAGCCAACTCACCGAAATTCAAGTCCCAGCTCTTCTCC
AAGCTCTTGGCTCTAAGCAGATTCATCCCTTGCGCGTAACTACATATCTTCGACGCGTACAGAGCTTGTCTAACATCATCAACCAA
CCTCTTCTTATCAATCCCACCTGAACCAGCAGTACCAATCTCTTCCTCCAACCCAGCTTCTCTCAACACTCTAGCAGCATTCTCCC
TCTCATCTTTCAATCCGCTCAAGTACCGACAATCCAACGAAGCGGCAATCGTCGGAGCCGCAACAGAGAGCTCCGCCGCCTGCTGA
ACAGTCCATTTCCCAGTACCTTTCATCCCAGTCTTATCCAAAATCTTATCCACCAACTCTCCACCACCGAACTCATCCTTCACCCT
AAAGATATCCGAAGTAATCTCAACCAAGAAACTCTCCAGCTCACCTCGGTTCCACTCCGCGAAAATCTCCGCGAGCTCCTCGTTGC
TCAACCCTCCAACGTTCTTCAACACATCGTACGCCTCGGAGATGAGCTGCATATCTCCGTACTCGATCCCGTTGTGCACCATCTTG
ACGAAGTTCCCAGATCCGCCTTCTCCGATGTAAGTAACGCAAGGCCCATCTTCAACCTGGGCCGCGACTTTCTCCAATATGTCTCT
AATGTTATCGTACGCCTGGAACGATCCTCCCGGCATCAGGGAGGGACCGTTGCGAGCTCCCTCCTCGCCTCCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_176601 6-phosphogluconate dehydrogenase [Arabidopsis thaliana] | 1746 | 1e-192 |
| XP_002886358 6-phosphogluconate dehydrogenase family protein [Arabidopsis lyrata subsp. lyrata] | 1742 | 3e-192 |
| NP_198982 6-phosphogluconate dehydrogenase [Arabidopsis thaliana] | 1705 | 6e-188 |
| XP_002868582 6-phosphogluconate dehydrogenase family protein [Arabidopsis lyrata subsp. lyrata] | 1705 | 6e-188 |
| XP_002509902 6-phosphogluconate dehydrogenase, putative [Ricinus communis] | 1685 | 1e-185 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| P21577 6-phosphogluconate dehydrogenase, decarboxylating | 1048 | 4e-113 |
| P80859 6-phosphogluconate dehydrogenase, decarboxylating 2 | 989 | 3e-106 |
| P52208 6-phosphogluconate dehydrogenase, decarboxylating | 961 | 5e-103 |
| Q9DCD0 6-phosphogluconate dehydrogenase, decarboxylating | 879 | 2e-093 |
| P85968 6-phosphogluconate dehydrogenase, decarboxylating | 879 | 2e-093 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9SH69 6-phosphogluconate dehydrogenase, decarboxylating | 1746 | 8e-193 |
| Q9FFR3 6-phosphogluconate dehydrogenase, decarboxylating | 1705 | 4e-188 |
| B9RCL8 6-phosphogluconate dehydrogenase, decarboxylating | 1685 | 9e-186 |
| B9RVA7 6-phosphogluconate dehydrogenase, decarboxylating | 1677 | 8e-185 |
| Q8LG34 6-phosphogluconate dehydrogenase, decarboxylating | 1677 | 8e-185 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G64190.1 6-phosphogluconate dehydrogenase family protein | 1747 | 3e-195 |
| AT5G41670.1 6-phosphogluconate dehydrogenase family protein | 1706 | 2e-190 |
| AT5G41670.2 6-phosphogluconate dehydrogenase family protein | 1706 | 2e-190 |
| AT3G02360.2 6-phosphogluconate dehydrogenase family protein | 1401 | 4e-155 |
| AT3G02360.1 6-phosphogluconate dehydrogenase family protein | 1401 | 4e-155 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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