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Information for unigene UN16629

FASTA Sequence
Unigene ID: UN16629Length: 1458 SSRSNP
AGGGGAAGTCCACCGCCTGCTACTCGGAGCTCCCCAGCTCACCAGTCTTGGCACTGGCTCCTTTAAACATGATAATCAGTCCGAGC
GAGAGCAAGAGCAAGAACCCGATTACGCCTCTGCTTTCCGTGCTTGTAAATCTGTAGTTTGCCTTTCGGGTTTCAGGGAGTTAATG
CCTGAGTACCTTCCTGCTATCTTACCCGTCTGCGCAAATCTTACCTCTCTCAATTTCAGTTATGCTAACATTTCTCCTGACATGTT
TAAGCCCATCATCCACACTTGCCACAAACTCCAGGTTTTCTGGGCTCTGGATTCGATATGTGATGAAGGACTGCAGGCAGTTGCTG
CGACTTGCAAGGAACTCCGTGAGCTCCGGATCTTCCCTTTTGATCCCCGAGAAGACAGTGAAGGTCCTGTCTCTGAATTAGGCCTA
CAAGCAGTCTCCGAGGGTTGTAGAAAACTTGAATCTGTTCTCTACTTTTGCCAGCGCATGACTAATGCCGCCCTGATAGCCATGTC
ACATAACTGTCCTGAGCTTACTGTGTTCAGGCTCTGCATAATGGGTCGACATAGGCCTGACCATGTGACAGGAAAGGCTATGGACG
AGGGTTTTGGTGCCATTGTTAAAAACTGCAAGAAACTAACTCGGCTCGCCGTCTCCGGGTTGCTTACGGATCAAGCTTTTAGGTAT
ATGGGTGAGTATGGGAAACTGATCCGTACTCTGTCAGTAGCTTTTGCAGGGGACAGTGACATGGCTCTGAGACATGTCCTCGAAGG
TTGCCCTAGACTACAGAAACTCGAGATAAGAGACAGTCCGTTTGGGGATGTTGCGTTACGCTCTGGTATGCATCGGTATTACAACA
TGAGGTTTGTTTGGATGTCGGCGTGCAAGCTGTCTATGGGATGTTGCAAGGATGTTGCACGTGCAATGCCAAATCTTGTTGTGGAA
GTAATTGGTTCGGATGATGATGATGAGAATAGGGAGTTTGTTGAGACTTTATACATGTATCGGTCTCTTGATGGTCCAAGGAAAGA
TGCACCACAGTTTGTCACAATTTTATAGGAAAGAGGAGCCTTTTCGTGTGTTGCTGAGAGAGCTTAAAGAGGGGAGAATGAGAATG
GGTTGGGGTAGGAATGCTGAAGATGATGATGGTGGTGGCGTCAGAGACAAAATGCATGATGGTTGATGATGATGATGATAGTTGCG
AAGGGCATAATGCATGATTGTTGTACCATTATTTATTTTCATTTCTTTTTTTTTTCTTCTTTAAAGTTCTTGGTTGGTTAGGTGGA
ACAATGGATGTATGTTTTGGGGGAGTATCGTTGTTAGTTAGACAGATGAGTTGGTTCTTATGTTTCTAATAAGCTGCACTTTTGGA
TCGATCTTTCTAGTTGTTGTTTAGAACTAATGAGACGTCTTTCCATTTTCAATTAATTTGAGATATTTCATCTGAATCCGTT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_568718 transport inhibitor response 1-like protein [Arabidopsis thaliana]17291e-190
XP_002865768 auxin F-box protein 5 [Arabidopsis lyrata subsp. lyrata]17237e-190
XP_002867664 hypothetical protein ARALYDRAFT_492408 [Arabidopsis lyrata subsp. lyrata]14791e-161
NP_567702 F-box protein FBX14 [Arabidopsis thaliana]14772e-161
CAB45074 transport inhibitor response-like protein [Arabidopsis thaliana]14772e-161

Swiss-Prot top hits (Blast detail)Scoree value
Q9LTX2 Transport inhibitor response 1-like protein17296e-192
Q8RWQ8 F-box protein FBX1414771e-162
Q9LPW7 Protein AUXIN SIGNALING F-BOX 38873e-094
Q9LW29 Protein AUXIN SIGNALING F-BOX 28693e-092
Q9ZR12 GRR1-like protein 18471e-089

TrEMBL top hits (Blast detail)Scoree value
Q9AUH6 F-box containing protein TIR114332e-156
B9H6Y0 F-box family protein14323e-156
B9RJT7 TRANSPORT INHIBITOR RESPONSE 1 protein, putative14206e-155
A5AZ08 Putative uncharacterized protein14091e-153
B9GV20 F-box family protein13874e-151

Arabidopsis top hits (Blast detail)Scoree value
AT5G49980.1 AFB5 (Auxin F-Box protein 5); ubiquitin-protein ligase17304e-193
AT4G24390.2 F-box family protein (FBX14)14786e-164
AT4G24390.1 F-box family protein (FBX14)14786e-164
AT1G12820.1 AFB3 (AUXIN SIGNALING F-BOX 3); auxin binding / ubiquitin-protein ligase8882e-095
AT3G26810.1 AFB2 (AUXIN SIGNALING F-BOX 2); auxin binding / ubiquitin-protein ligase8702e-093

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
114  50%
 
63  38%
 
101  13%

Unigene MembersMember information