Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN16630

FASTA Sequence
Unigene ID: UN16630Length: 1256  SNP
GGGGACGACCAATGGATGTGTAATGAGAACCCCACACACCCATCGAAACGCTTGGCTCTCAAAACATTTCGACTTCTATTTATTAT
TTAAAGATATTTCTTCCCTTCATTGCTTCTCCATCTTTCTCTTTTTCTTTCTTCTCTCTCGAAGTTTCATTGGATCAGAAAAAAGA
AAGGTGTCTATCAACTTGGTAATTAAAAATGGCGTACGAGGAGAACTTTCAGAAAACTTCCGGACCCAAGTATGATTGTCTTTTAT
TCGATATAGATGATACTCTTTACCCTTTCAGTTCTGGTCTCGCTACGCTTGTTAAAAACAACATTCAAGAGTATATGACCCAGAAA
CTTGGTATTGAAGAAGATAAAGTCCAAGAACTTTGTCTTTCGCTTTACAAAATCTATGGAACTACTATGGCTGGTCTCAAGGCTGT
GGGTTATGACTTTGACTATGACGATTTCCATCGTTTTGTTCATGGGAGATTGCCATACGCAACACTCAAGCCTGACCCTGTTCTGA
GGAACATTATTCTCAGCTTGCCTATTCGCAAAGTGGTTTTCACCAATGCAGACAAGGCTCATGCAGCCAAGATCATTGGCTAGGCT
AGGCCTAGAGGACTGCTTTGAAAGAATCATATCTTTCGAGACTCTCAACCCAAACACCAAAACTGAATCTCCTGTTGCTGCTAGTA
AAACCAGAGAGATCTTCGACATAAGCAGTTACATGGCAAATCCTGACCCAAGCGTTGAACTCCCAAAGACTCCGGTTGTTTGTAAA
CCATCTGAAGGAGCATTCGAACAGGTTTTCAAGATGACCAACATCAATCCTCACAAGACATTGTTCTTTGATGACAGCATCCGTAA
CATTCAAACCGGGAAACGTGTGGGTCTCCACACTGTATGGGTTGGGACCTCACACAAAGCTGAAGGGGTGGATATTGCGTTGGAGC
ATATTCACAACATACGTGAAGCTTTTCCTGAACTGTGGGATGCTGCTGACGACAAAGCCGAGGAGATTAGAGCCAGGCAGAAGGTT
GCCATTGAAACCATAGCTTAAAACAAACATTTCATTTCAGCTGCTGATAGTAACACATTTCTTATCATCACTATACTCACTCTTTG
AGGAGAAAAAAAATAATAAGTGTAATCTAAAGCAAGCCTTTTATTGAGAGAAACATGGAATGTAATGAAACAAGTTGAGTTTTATT
TTAATTTGATAATATAAAAAAAATGAATGCAAACATCTTTTTATTCTCCTTT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002866331 hypothetical protein ARALYDRAFT_496081 [Arabidopsis lyrata subsp. lyrata]6959e-071
NP_851223 haloacid dehalogenase-like hydrolase domain-containing protein [Arabidopsis thaliana]6832e-069
NP_200756 haloacid dehalogenase-like hydrolase domain-containing protein [Arabidopsis thaliana]6832e-069
AAM67205 putative ripening-related protein-like [Arabidopsis thaliana]6771e-068
BAE98702 putative ripening-related protein - like [Arabidopsis thaliana]5192e-050

Swiss-Prot top hits (Blast detail)Scoree value
Q09893 Uncharacterized protein C24B11.051344e-007
P40025 Phosphate metabolism protein 81336e-007
P53078 Protein SSM11264e-006

TrEMBL top hits (Blast detail)Scoree value
Q3E7J6 Putative uncharacterized protein At5g59480.26831e-069
Q9LTI2 Putative ripening protein6831e-069
Q8L8N4 Putative ripening-related protein-like6777e-069
Q0WVZ6 Putative ripening-related protein-like5192e-050
A9PFH3 Predicted protein4967e-048

Arabidopsis top hits (Blast detail)Scoree value
AT5G59480.1 haloacid dehalogenase-like hydrolase family protein6846e-072
AT5G59480.2 haloacid dehalogenase-like hydrolase family protein6846e-072
AT5G02230.1 haloacid dehalogenase-like hydrolase family protein4642e-046
AT5G02230.2 haloacid dehalogenase-like hydrolase family protein4642e-046
AT3G62040.1 catalytic/ hydrolase4427e-044

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
96  43%
 
84  29%
 
103  21%
 
181  7%

Unigene MembersMember information