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Information for unigene UN16646
| FASTA Sequence |
| Unigene ID: UN16646 | Length: 689 |
SSR | | AGGATAAAAAAATGGCGTTGAACGTGGTATCATCATCTGCGCGTGTATCTTCAGCCACGTCTTTGACCTCGTCCACGATCAAAAAA
GCCTTGGTTACACCTCGATTTGCTTCCTCTCTCCCGAATCTCAGCCTCCTTCGTCGAGGTTTTCGTCGTATAACAGCAATGGGTTC
TTCAGCTCCCGGATCGGTTAACAAGGCAGAGGAAGAGTGGCGTGCGATTCTATCTCCTGAGCAATTCAGGATCCTCAGGCAGAAAG
GCACTGAATATCCAGGGACAGGAAAATACAACAAAGTATTCGCAGACGGGATCTATAGCTGCGCAGGATGTGGGACTCCTCTATAC
AAATCCGCCACCAAGTTCGACTCTGGCTGTGGCTGGCCTGCTTTCTTTGACGGCCTCCCAGGGGCCATTAACCGAACCGCGGATCC
AGACGGGAGAGGAATCGAGATCACTTGTGCGGCTTGTGGAGGACATCTCGGACATGTTTTCAAAGGAGAAGGTTTCCCTACTCCTA
CCGATGAGCGACACTGTGTCAACAGTGTCTCCCTCAAGTTCGCACCGGGGGATGCAACCTTGTGATAATAATAATAATAATGTATA
CTTGTGATGTGTGAAACTTCGCTGGCTCGCATTTTGTTTTGTCTTTGCTCTGTGAAACTAGTGTGACTGCTAGTAGTAATAAGGTC
G
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002867820 methionine sulfoxide reductase domain-containing protein [Arabidopsis lyrata subsp. lyrata] | 738 | 3e-076 |
| NP_567639 peptide methionine sulfoxide reductase B2 [Arabidopsis thaliana] | 726 | 8e-075 |
| AAM62876 unknown [Arabidopsis thaliana] | 719 | 5e-074 |
| ABU49226 chloroplast methionine sulfoxide reductase B2 precursor [Nicotiana tabacum] | 665 | 9e-068 |
| XP_002265129 PREDICTED: hypothetical protein [Vitis vinifera] | 654 | 2e-066 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9C5C8 Peptide methionine sulfoxide reductase B2, chloroplastic | 726 | 4e-076 |
| Q6AUK5 Peptide methionine sulfoxide reductase B3, chloroplastic | 633 | 2e-065 |
| Q10L32 Peptide methionine sulfoxide reductase B5 | 608 | 2e-062 |
| Q9M0Z6 Peptide methionine sulfoxide reductase B3 | 593 | 1e-060 |
| Q9ZS91 Peptide methionine sulfoxide reductase B5 | 576 | 1e-058 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| A7U629 Chloroplast methionine sulfoxide reductase B2 | 665 | 7e-068 |
| B9GJ03 Methionine sulfoxide reductase type | 643 | 2e-065 |
| B7S5L0 Methionine-R-sulfoxide reductase B1 protein | 635 | 2e-064 |
| B9RX37 Methionine sulfoxide reductase, putative | 634 | 3e-064 |
| B8AY37 Putative uncharacterized protein | 632 | 4e-064 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT4G21860.1 MSRB2 (methionine sulfoxide reductase B 2); peptide-methionine-(S)-S-oxide reductase | 727 | 3e-077 |
| AT4G04800.1 methionine sulfoxide reductase domain-containing protein / SeIR domain-containing protein | 594 | 7e-062 |
| AT4G04830.1 methionine sulfoxide reductase domain-containing protein / SeIR domain-containing protein | 576 | 9e-060 |
| AT4G21850.1 methionine sulfoxide reductase domain-containing protein / SeIR domain-containing protein | 543 | 6e-056 |
| AT4G04810.1 methionine sulfoxide reductase domain-containing protein / SeIR domain-containing protein | 542 | 8e-056 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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