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Information for unigene UN16648
| FASTA Sequence |
| Unigene ID: UN16648 | Length: 638 |
SSR | | TTTTTTTTCTCGTTCTCTCCGCTGAGAAATCGAAACTTTTTCTGTTAAAGACGACGACGACGACGGTGATGGAGGCTCAATTACTC
GGTTGGCTCTCGCCTCTCGTGATCTCCTCCTTCGCTCTTATGATCTCCGTCTTCGCTTTCTACGCACTTCTCGTGAAGACGAGACG
GAACAGTAACAGAGTACTAGACCCTACAACTTCGAAGATCCATCACGATCGGACCGTCACCTCCACCGTTGTATCCCTGAACGTTA
GAGGCGGAGATAACGTCGCTGACGTCATCGTTGTTGGAGCCGGAGTCGCTGGTTCTGCTCTGGCGTACACTCTTGGAAAGGATAAT
CGTCGAGTTCATGTGATTGAAAGAGATTTATCGGAGCCGGATCGTATTGTTGGAGAGCTTTTACAACCTGGTGGCTATCTCAAGTT
AATCGAGTTGGGTATTGAAGATTGCGTGGAGGAAATTGATGCTCAGAGAGTGTATGGCTATGCACTTTTCAAGAATGGGAAACGCA
TTCGCTTAGCTTACCCCTTGGAGAAGTTTCACACAGATGTATCTGGAAGGAGCTTTCACAATGGACGTTTTATTCAAAGAATGCGT
GAGAAAGCTGCTTCACTTCCCAATGTTCAGTTAGAG
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| GenBank top hits (Blast detail) | Score | e value |
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| XP_002886690 hypothetical protein ARALYDRAFT_475389 [Arabidopsis lyrata subsp. lyrata] | 684 | 5e-070 |
| NP_564734 squalene monooxygenase [Arabidopsis thaliana] | 683 | 7e-070 |
| AEM36345 At1g58440 [Arabidopsis thaliana] | 683 | 7e-070 |
| XP_002310880 predicted protein [Populus trichocarpa] | 590 | 4e-059 |
| XP_002530610 Squalene monooxygenase, putative [Ricinus communis] | 588 | 7e-059 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| O48651 Squalene monooxygenase | 532 | 1e-053 |
| O65404 Squalene monooxygenase 1,1 | 405 | 6e-039 |
| O65726 Squalene monooxygenase 1,2 | 392 | 2e-037 |
| O65402 Squalene monooxygenase 1,2 | 388 | 5e-037 |
| O65727 Squalene monooxygenase 1,1 | 375 | 2e-035 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9SM02 Squalene monooxygenase | 683 | 5e-070 |
| B9HFU3 Predicted protein | 590 | 3e-059 |
| B9SX91 Squalene monooxygenase, putative | 588 | 5e-059 |
| Q2HY08 Squalene epoxidase | 576 | 1e-057 |
| B9R6V0 Squalene monooxygenase, putative | 573 | 3e-057 |
| Arabidopsis top hits (Blast detail) | Score | e value |
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| AT1G58440.1 XF1; squalene monooxygenase | 683 | 3e-072 |
| AT4G37760.1 SQE3 (squalene epoxidase 3); squalene monooxygenase | 521 | 2e-053 |
| AT2G22830.1 SQE2 (squalene epoxidase 2); FAD binding / oxidoreductase/ squalene monooxygenase | 517 | 5e-053 |
| AT5G24150.1 SQP1; squalene monooxygenase | 405 | 5e-040 |
| AT5G24150.2 SQP1; squalene monooxygenase | 405 | 5e-040 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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