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Information for unigene UN16660
| FASTA Sequence |
| Unigene ID: UN16660 | Length: 1116 |
SSR | | GGTAGCGTCCAATGGCTGTGATAAATAAGATTTGAATTCATTTCATTTGAACATAGACTAAGAATATTCTATCTAATAGGCTAAAA
AATACACAGCTGAAGTGCATAACACCATGAAGAGCCAAGCCAGCCTTAAAGAAAGATGGTCTCACTCTAATCTATATAGAAACTAC
AAAACATGTCCGAAATCCCCTGAGAGTTGTTGAACCATCTTAGCCAGCAAAACCATCTTAGCCGAGAGCTGTGTAAAAGCATCAGA
ACAATGCCATTGATCAACAGAGTTCTTACAAACTATTTGCCTTTTTCTTTTTTTGTTTCTGGAGCAAATATAGCATCAACTTCGAG
GTGGTGGTTCATCTTGAAATGGAAGTGGAACTGACATGGCATTTCCGTAGAAATCTTCCAAGTTATAGAAGGTTCTTTGTGGAGGT
AAGAAAATATGGATCACCACATCTCCATAGTCCAACAATGTCCATGCATTTGGCTTTACATCTCCATTAGCAACTCTCCCCATACT
TCTTCTCAGCCAGGTCTCTCATCCTAGACCCGATTGCATCGATTTGAGGGCGGGAAAATGCAGTGGTGATGATGAAAAAACGAGTC
CAGTAGACGAGAGGCTTCACAAAGAGAACCTTAATGTCTCCGGCTTTCACTTCACTAGCAACCTTAGCCATTTCAACAGCAAATGC
TAAACTTTCAGCGTCATCATCAACCTCAGCTGATGGAGACTTTACATCGTCGCTCTTGTAAACAACCTTCCCATACTTGTTGAACA
AGTCGTCGAACATCTCATCAGTATCTTCACTTACATCCGAGAGGAAGCCATCTTCAGCTCCCTTTCCAACAGCGAAGCTCTTCGAG
TTACTTCTGAGAGTTGTCTGAACTCTGCCTCTAGATAGTCGCAGAGGGGAATTATACGGTGCGGAGAGGTCTCCATTGTTGAGGCA
TAAGAGTGGTGATGAAGAAGAAGAAGAAAGCTTTCTAGGTATTTGAGAGGACGAACATGGTAATCGAGAACCACCGGTAAGCAGAG
CTCCGGCGACGGTGGAAGATGCCATTGTCTCGTCTCGTCTCGAAGGTAAGGAGAGAGTTTCGAAAACACTGGTCGCCGTTTTCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_566439 Lojap-related protein [Arabidopsis thaliana] | 698 | 3e-071 |
| AAM65470 putative iojap protein [Arabidopsis thaliana] | 693 | 1e-070 |
| XP_002882797 hypothetical protein ARALYDRAFT_897503 [Arabidopsis lyrata subsp. lyrata] | 591 | 9e-059 |
| ACU14126 unknown [Glycine max] | 476 | 2e-045 |
| XP_002513411 Protein Iojap, putative [Ricinus communis] | 454 | 7e-043 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9LDY9 Expressed protein | 698 | 2e-071 |
| Q8LAC1 Putative iojap protein | 693 | 9e-071 |
| C6SY03 Putative uncharacterized protein | 476 | 1e-045 |
| B9RI42 Protein Iojap, putative | 454 | 5e-043 |
| A9PCK9 Predicted protein | 418 | 7e-039 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G12930.1 INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Iojap-related protein (InterPro:IPR004394); Has 2517 Blast hits to 2517 proteins in 833 species: Archae - 0; Bacteria - 1551; Metazoa - 22; Fungi - 0; Plants - 35; Viruses - 0; Other Eukaryotes - 909 (source: NCBI BLink). | 701 | 6e-074 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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