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Information for unigene UN16675

FASTA Sequence
Unigene ID: UN16675Length: 841 SSR 
GGGCCGGTATCAAAAAAAAAGGATAATCAAATAAACTAATCATCATCATCATCATCATCATCATCATCCCTTCCGTCTTCAAATGT
CTTCTCGCCGGAGAGTTCTTCTTAAGGTTATCATCCTCGGCGATAGCGGGGTTGGGAAGACATCTTTGATGAATCAGTTTGTGAAC
CGCAAGTTTAGTAATCAGTACAAAGCTACGATTGGAGCTGATTTCTTGACTAAAGAGGTTCAAATTGATGACCGCATCTTCACTTT
ACAGATTTGGGATACTGCTGGACAAGAAAGGTTCCAAAGCTTGGGAGTAGCTTTCTACAGAGGAGCTGACTGTTGTGTTCTTGTGT
ACGATGTCAATGTTATGAAATCTTTTGAGAATCTTAATAACTGGAGGGAAGAGTTCTTGATTCAAGCTGGTCCATCCGATCCTGAC
AACTTCCCGTTTGTCGTCTTGGGGAACAAGACCGATGTTGATGGTGGCAAAAGCCGAGTGGTTTCTGAGAAGAAAGCAAAGGCGTG
GTGTGCGTCTAAAGGAAACATTCCTTACTTTGAGACATCTGCCAAAGAAGGATTCAATGTAGACGCAGCTTTCGAGTGCATCACCA
AAAATGCTTTCAAGAATGAACCTGAAGAAGAACCGCACCTACCCGACACGATTGATGTTGCTGGAGGTCAGCAACACAGATCAACA
GGGTGTGAATGCTAAATCAACCAAAGAGTTTATTTCAGTTCATTTGAATTATTACAGATTCTAACGAACTATTAGCTCATTTTCTT
TTGGGTTCCATACAGTGTTTTCAATCATGTAGTGTGACAAAATATCATTTATGAATGCATTCGAAAT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_175638 RAB GTPase homolog G3D [Arabidopsis thaliana]10648e-114
XP_002882978 hypothetical protein ARALYDRAFT_479064 [Arabidopsis lyrata subsp. lyrata]10182e-108
NP_188231 RAB GTPase-like protein G3C [Arabidopsis thaliana]10092e-107
XP_002516039 protein with unknown function [Ricinus communis]9876e-105
XP_002284408 PREDICTED: hypothetical protein [Vitis vinifera]9868e-105

Swiss-Prot top hits (Blast detail)Scoree value
Q9XER8 Ras-related protein Rab79847e-106
O24461 Ras-related protein Rab79802e-105
Q40787 Ras-related protein Rab79372e-100
P31022 Ras-related protein Rab79121e-097
P93267 Ras-related protein Rab7A9112e-097

TrEMBL top hits (Blast detail)Scoree value
Q9C820 AtRab7210645e-114
Q9LW76 At3g1610010091e-107
B9RQM0 Putative uncharacterized protein9874e-105
B7FN46 Putative uncharacterized protein9858e-105
C6SWS6 Putative uncharacterized protein9812e-104

Arabidopsis top hits (Blast detail)Scoree value
AT1G52280.1 AtRABG3d (Arabidopsis Rab GTPase homolog G3d); GTP binding10652e-116
AT3G16100.1 ATRABG3C (ARABIDOPSIS RAB GTPASE HOMOLOG G3C); GTP binding10106e-110
AT3G18820.1 ATRAB7B (ARABIDOPSIS RAB GTPASE HOMOLOG G3F); GTP binding9192e-099
AT1G49300.1 RABG3E (RAB GTPASE HOMOLOG G3E); GTP binding9041e-097
AT1G49300.2 RABG3E (RAB GTPASE HOMOLOG G3E); GTP binding9041e-097

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
102  67%
 
91  33%

Unigene MembersMember information