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Information for unigene UN16677

FASTA Sequence
Unigene ID: UN16677Length: 726 SSR 
GGAAAAAGGCGTAGCTTGAAATCTGTGAAAATCGAATCGGAGAAGAGAAGAGATGGCTGAGGAACACAAACACGACGAATCTGTGA
CGGCTACGGAGCCAGCTGTGGAGATCGTGGAGAGGGAATCGTTGATGGATAAGATAACGGAGAAGATCCACCACGGTGGCGATTCC
TCTTCGTCGTCTTCATCGTCTGATGACGAGGACGATAAGAAGAAGAAGAAGGAGAAGAAGCCGGTGTCTCCGTCTTCTATGAAATC
GAAAGTCTACCGCTTGTTCGGAAGGGAGAAGCCCGTTCATAAGGTTCTCGGCGGTGGAAAGCCGGCGGATATATTCATGTGGAAGG
ACAAGAAGATGTCAGGTGGTGTGCTTGGTGGTGCTACAGCCGCGTGGGTTCTGTTTGAGTTGATGGAGTACCATCTTCTCACTTTG
CTTTGCCACGTCATGATTGTTGTTCTCGCTGTGTTGTTTCTTTGGTCTAATGCAACCACGTTCATCAACAAGTCGCCGCCAAAGAT
TCCTGAAGTTCATATCCCTGAAGAGCCTATCCTTCAGCTTGCATCTGGGCTCAGAATCGAGATCAACCGTGGACTCTCCTCTCTTC
GTGAGATTGCTTCTGGCAGGATCTCAAGAAATTCCTCTGTGCTATAGCCGGCTTGTGGGTTCTATCCATCATGGGCGCTGGTTCAA
TTTCTTGACATTGGCATACATAGCTCTGTGCTACTCTT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_194094 reticulon-like protein B1 [Arabidopsis thaliana]8792e-092
BAJ33905 unnamed protein product [Thellungiella halophila]8782e-092
ACC91263 reticulon family protein [Capsella rubella]8773e-092
XP_002869770 VIRB2-interacting protein 1 [Arabidopsis lyrata subsp. lyrata]8461e-088
NP_192861 reticulon-like protein B2 [Arabidopsis thaliana]7796e-081

Swiss-Prot top hits (Blast detail)Scoree value
Q9SUR3 Reticulon-like protein B18842e-094
Q9SUT9 Reticulon-like protein B28035e-085
Q9FFS0 Reticulon-like protein B45992e-061
Q9SH59 Reticulon-like protein B35705e-058
O82352 Reticulon-like protein B55445e-055

TrEMBL top hits (Blast detail)Scoree value
B2WS91 Reticulon family protein8772e-092
B9RCJ7 Putative uncharacterized protein6262e-063
B7FIA7 Putative uncharacterized protein6155e-062
B9RDZ1 Putative uncharacterized protein5922e-059
Q2L7C0 Putative uncharacterized protein5878e-059

Arabidopsis top hits (Blast detail)Scoree value
AT4G23630.1 BTI1 (VIRB2-INTERACTING PROTEIN 1)8842e-095
AT4G11220.1 BTI2 (VIRB2-INTERACTING PROTEIN 2)8035e-086
AT5G41600.1 BTI3 (VIRB2-INTERACTING PROTEIN 3)5992e-062
AT1G64090.1 reticulon family protein (RTNLB3)5572e-057
AT2G46170.1 reticulon family protein (RTNLB5)5445e-056

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
61  50%
 
121  50%

Unigene MembersMember information