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Information for unigene UN16686
| FASTA Sequence |
| Unigene ID: UN16686 | Length: 1914 |
SSR | | CCGCAATTACCATTTTTTCCTAGTGAATCATCAAAAGAAGACCAATACATAAAGCTTACAATGTCATTACAGAGAGTAAAACATAT
ATAAATTCGAGTACGGAAATTTTCTCAGAGACAAACCGAACTAAACCAAAACAAAACCCGAATTAAGACCTTCGAGTTGCTGATGA
ACCGGGTTCTCGCATCTCCCACGCCGGTTTACTCTCTCTGGAGACATCCGACTTGATTGCTCGAACCAATGGCTTCATGACTAGCA
GGTATTGGAATGCAAAGATTAATGGGATTAGTCTTTTTCCTCTTGCGTTTGGGTTTGGCCCTTCCACCAGTTTCTTGTCAACGTGG
ATCGACTTGTTGCCATTAAAAGAGATCTCTGTGATTGTCTTGTACAGATTCGTAATCCAACTACTTCCGTCTGGAAGAATCTTTTC
ATCGCTTTCATTCTTATGACATCTCCCGCTGTTCTCAACAAGAATAACAGGAAGAGATGAATCCTGCATATCCTGTTTCTTCAGTT
GAGCGCTAGCATAGATCAGTTTCAGAAGAGCGTCGGATCTTCTGGAGACAAAGAGATCATAGTTTAACCCGTCCGGGGGAGAGAAC
TGAGCATGACTGAGGACAAGAGCAGACTTCTTCCATATCTCTTTACCAAATGCATCGGTTATAGCCGTCACCACCTGCTTATCCAA
GTCATCCACCCGATACACATCCAAACGATCTACGTATAGTAGCACATCTATAGTCTTGTTCAGGAGAAATCCTTTTATAAGGTTGA
CGGCTTGATCATTCACATATCCTCCCTCAATAAGACCAGGAGTGTCGATTATGTTTAATGTAAAACCCGACCTTGAGCGAGAGACC
AAGGAAGGTCTCAGTCCTTCAGACTGGAAAGTACTGACTGCAGCAGCTCTCTCGCCCATAACTGAATTCACAGTAGAAGACTTTCC
AACACCTCCTTTCCCCATCACAAGTACTGTTAGCGAGCTCACATCCTCTTCTTTGAACTTGCCAAGGATCTCGAGCAACTTAGATT
GAGTAGCAGGTGGGAACTGTTGAATACCGATCCATTCACGAGACATTTGCAAAGCTGCCATGAACACAAATCCTTGTCTTTCGAAG
TAAAAACTGGAGATAGCGACGCCAGAAAAAAAGAGAAAGAGACGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGCATCTG
AGAGAGAGGAGAGGGGATTGATATTTGCTGTAACGGAATCGAAAAAGTATAAAGGTGAAAGAGGTAGAAGGAAGCTCTGGATATCC
GTCGGCGGCGACGGTGGTGGTTATGCCTGTTGGCTGGCTCTGAGGTTGTATCAGGCTTGTTACTACTAAGTGGATTGTGTTGTTTC
TGAGATTATGGAGCAAGTTTTCGTCTGGCCAAGCTCCTTCCATCATCGGCTTCTCTCTTTCCAAGAAGCGCTCGATTGGCGTTTTC
TTGTTCCTTCTCATTTCCTTGTTGGCTCTTTCGTTAACTGCACTTAGTTTTCACACACTCTCCTAATCAAGTTTAATTAGTGAAGC
CGTCAGGCAAACAGGGTTGAAGTCTGCATATTCTTCCTTCGCATACTCCCAGAGAAACCTCTTAATCCCCCTCTTTTTTCTTATGG
GCGCTTGTTGAAGAAGAATATATCACTTTCGTTTTCAAGTTTACATGATTCTATTTTCTTGAGTATGAACCCCCTGAGTGAGTTGT
TGTCTGCTTCAGGTCTTTCCTGTTAGCCAACACATTCTTTCTTGTTGGTTCCTTTCTGTCTTTGAGTTCTCAGTATGTCTTTTCCT
CTTCTATTGCTGTCTTTTTTTTCCCTTTATGGTCAACCCATTGGTGCTCATAGTAATAACGGTCAGTCTACCCAGCTGGAGAATCA
TTGATTTACTGCTTTTGTTTCT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002873181 ATTOC34/OEP34 [Arabidopsis lyrata subsp. lyrata] | 1409 | 2e-153 |
| NP_196119 translocase of chloroplast 34 [Arabidopsis thaliana] | 1378 | 1e-149 |
| AAD09203 GTP-binding protein [Arabidopsis thaliana] | 1368 | 1e-148 |
| AAM65983 GTP-binding protein [Arabidopsis thaliana] | 1368 | 1e-148 |
| XP_002274573 PREDICTED: hypothetical protein [Vitis vinifera] | 1163 | 8e-125 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q38906 Translocase of chloroplast 34, chloroplastic | 1378 | 4e-151 |
| Q41009 Translocase of chloroplast 34 | 1068 | 4e-115 |
| O23680 Translocase of chloroplast 33, chloroplastic | 980 | 6e-105 |
| Q9LUS2 Translocase of chloroplast 120, chloroplastic | 318 | 3e-028 |
| Q9SLF3 Translocase of chloroplast 132, chloroplastic | 318 | 3e-028 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B5RID3 At5g05000 | 1378 | 7e-150 |
| A5BU26 Putative uncharacterized protein | 1162 | 7e-125 |
| B3TM35 Toc34-2 protein | 1094 | 6e-117 |
| C6TNK6 Putative uncharacterized protein | 1086 | 5e-116 |
| C6T7C5 Putative uncharacterized protein | 1083 | 1e-115 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G05000.2 TOC34 (TRANSLOCON AT THE OUTER ENVELOPE MEMBRANE OF CHLOROPLASTS 34); GTP binding | 1379 | 3e-152 |
| AT5G05000.3 TOC34 (TRANSLOCON AT THE OUTER ENVELOPE MEMBRANE OF CHLOROPLASTS 34); GTP binding | 1379 | 3e-152 |
| AT5G05000.1 TOC34 (TRANSLOCON AT THE OUTER ENVELOPE MEMBRANE OF CHLOROPLASTS 34); GTP binding | 1379 | 3e-152 |
| AT1G02280.1 TOC33 (TRANSLOCON AT THE OUTER ENVELOPE MEMBRANE OF CHLOROPLASTS 33); GTP binding / GTPase/ protein binding | 980 | 5e-106 |
| AT1G02280.2 TOC33 (TRANSLOCON AT THE OUTER ENVELOPE MEMBRANE OF CHLOROPLASTS 33); GTP binding / GTPase/ protein binding | 980 | 5e-106 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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