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Information for unigene UN16700

FASTA Sequence
Unigene ID: UN16700Length: 1271  SNP
GGGAAAACCCTAGCTGTTACTGTTATCTCCGTCACTCTCTTCTGAGAACAGAGGAACTCGAGTCTTTCTTTACTCTTTACTCCGCA
AGCAAGCAACAATGGTGAAGGCAACAAAGGCGGAGAAGAAGATCGCTTACGACGCGAAGCTATGCCAGCTCATCGACGAGTTCACA
CAGATCTTAGTCGTCGCCGCGGACAACGTGGGATCGACTCAGCTACAGAACATCAGGAAGGGACTTCGCGGAGACTCAGTGGTGCT
CATGGGGAAGAACACCATGATGAAACGTTCGGTTAAGATCCACGCCGAGAACACGGGGAACACTGGGATCCTCAATCTCATGCCCC
TCCTTCAGGGAAATGTTGGTTTGATCTTCACCAAGGGTGACCTCAAGGAAGTGAGCGAGGAAGTTGCCAAGTACAAGGTCGGTGCT
CCTGCTCGTGTGGGTTTGGTAGCCCCAATTGATGTGGTTGTCCAGCCTGGTAACACCGGTCTCGATCCATCCCAGACATCTTTCTT
CCAGGTTCTTAACATTCCAACTAAGATTAACAAGGGAACAGTCGAAATCATCACCCCTGTTGAGCTCATCAAGCAAGGTGACAAAG
TCGGTTCTTCTGAGGCCGCCCTTCTAGCCAAGCTCGGCATCAGGCCGTTCTCATACGGTCTTGTTGTCCAGTCGGTTTACGACAAT
GGCTCAGTCTTCAGCCCAGAGGTTCTTGATCTCACGGAAGATGACCTTGTCCAGAAGTTTGCCGCTGGTATCTGCATGGTCACTTC
CTTGGCTCTAGCTATCTCTTACCCTACCCTTGCTGCTGCCCCGCATATGTTCATCAATGCATACAAGAATGCCTTGGCTATCTCTG
TTGCCACTGAGTACACTTTCCCTCAAGCAGAGAAGGTTAAAGAGTTCTTGAAGGATCCTAGCAAGTTTGCTGTTGCTGTAGCGGCT
GTGTCTGCTGATGCGGGTGGTGGTGCTTCAGCTGGAGCTGCCAAGGTAGAGGAGAAGAAGGAAGTGGTTGAGGAATCAGATGAAGA
AGACTATGGTGGTTTTGACATGTTCGGTGATGAGTAGATTAATATATGATTTTTTTACACAAAGACACATTATGACTTCTCTATTA
CATCAAGAGACACATTGCATTGAGACACTTTTTAGTGTTGATTTGTCCATTTTATCTTTTTTACCATCTGATCCAATTATTTCTGT
TTTGAATTCTTTTGTCTTTCTTTGAATCTACTTGATGCAGTCTTTAACTAATATAGTGGAACTCTAC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002884720 60S acidic ribosomal protein P0 [Arabidopsis lyrata subsp. lyrata]14602e-159
XP_002882720 60S acidic ribosomal protein P0 [Arabidopsis lyrata subsp. lyrata]14592e-159
NP_187734 60S acidic ribosomal protein P0-3 [Arabidopsis thaliana]14557e-159
AAM65265 60S acidic ribosomal protein P0-C [Arabidopsis thaliana]14531e-158
NP_187531 60S acidic ribosomal protein P0-2 [Arabidopsis thaliana]14484e-158

Swiss-Prot top hits (Blast detail)Scoree value
P57691 60S acidic ribosomal protein P0-314553e-160
Q42112 60S acidic ribosomal protein P0-214482e-159
O04204 60S acidic ribosomal protein P0-113049e-143
P50346 60S acidic ribosomal protein P012932e-141
P41095 60S acidic ribosomal protein P012456e-136

TrEMBL top hits (Blast detail)Scoree value
B9SLK4 60S acidic ribosomal protein P0, putative13372e-145
B7FJF1 Putative uncharacterized protein13363e-145
B9HSR0 Predicted protein13273e-144
A9PF35 Putative uncharacterized protein13212e-143
B9HHM2 Predicted protein13166e-143

Arabidopsis top hits (Blast detail)Scoree value
AT3G11250.1 60S acidic ribosomal protein P0 (RPP0C)14562e-161
AT3G09200.1 60S acidic ribosomal protein P0 (RPP0B)14482e-160
AT2G40010.1 60S acidic ribosomal protein P0 (RPP0A)13048e-144
AT3G09200.2 60S acidic ribosomal protein P0 (RPP0B)11523e-126

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
71  10%
 
102  20%
 
85  50%
 
92  20%

Unigene MembersMember information