Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN16725

FASTA Sequence
Unigene ID: UN16725Length: 1174  SNP
GGACACTTCTCGAAGCACTTCTCTTTCTAGTATCTCTCTCTGTCTCTTTTATTTTCCTTCTCCCTAAGCTACATAGGCACCCTAAA
CCTCTCTTTTGACCTACTGTTAGTGAGTGAGAGAGGGCCTGCAAAGATAAAAAGGGCATACATCATTGAAGCTCTTTACTTCTCTT
TTTTTTGTTCCCAATCTCTCAGCCTAGGCTTCTCCCATTTCAAGCAAAAAAATAAAGAATGGTTTCATCTCAGCAACGTCTCTCTT
TCTCAAACTCAATGCTGGTCTTCTTCTTCTGCTTCCTCTCTCTGTTCTGTCGTCCTTCTCTCTCCGCCTCATTTCTCGTTGATGGT
GTCTCTGTCTGGAAAACTCCCGTTGTTCATGTCAGCGACTCTGTTGTTTTCAGACATAAGTACGGAAACGATCTATACATCTTCAG
GACAAAAGATGCATTCAATGTCTGCGACTTTACTCAAGCCACTCTTCTTACAAAATCTAACTCCACCTCCTTCACGTGGTACCCAT
CAAGACCAGGCTCCTACTACTTTTCCTTCACAAACAACACATCTCTTCCCAAAACCTGCCAAGTCAGCCAGAAGCTCACAGTCCAA
GTCATCCTCGCAGCCGCACCTTCACCGTCACAGCCACCAACACCAGCTATAGCTCCTGTTCCTGTCTCGGAAGGAGGAGTGGTCTC
ATCTTCTCCTTCTTACCCGTGGCCATTAGGTCCAAGAGAAGGTTCAGCTTTATCTCCAGGACCATCTCCCTCAGAGATCACTTCAG
TGACGGTTCCTGGAAAAGACGGAGTTCCGTTTATCAACAGTAACCCGGCTGTTCCACTTCCCACCGGAGAAGTCGACTCTACTTCC
ATTAACCCTTTACCCACTTCCACAAACTCAGCACATCAGGTAATGATGACAGTAACGGTGAAGCTAGTTATGTGCTGTGTAGCCAT
GTTTCTTCTACTGTAGAGAGAGTATTAGTAGCTTTTTCCAATGGATGAATGATTACGTTTTCTGATCTTATATGCTAATTACAACT
TAATTTAGATCTCGTAATCATTCATTCATTCATTCTCCCTTTTGCTTTTCTCTTATGGTTAGGATGTCTTTTATTAGAATGTTAGG
TCGTTTATATTTTGTAATGTGCATTTTTTTCTTATAAAGTAATGTAGTTTCTTTCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_564135 cupredoxin-like protein [Arabidopsis thaliana]10391e-110
AAM61317 unknown [Arabidopsis thaliana]10282e-109
XP_002890426 hypothetical protein ARALYDRAFT_313015 [Arabidopsis lyrata subsp. lyrata]10211e-108
AAF80652 T22I11.8 [Arabidopsis thaliana]9691e-102
BAD93721 hypothetical protein [Arabidopsis thaliana]6312e-063

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q0V805 At1g2109010397e-111
Q8LFM9 Putative uncharacterized protein10281e-109
Q9LPU4 T22I11.89699e-103
Q56YX2 Putative uncharacterized protein At1g210906311e-063
B9SE70 Putative uncharacterized protein5844e-058

Arabidopsis top hits (Blast detail)Scoree value
AT1G21090.1 hydroxyproline-rich glycoprotein family protein10394e-113

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
112  20%
 
122  20%
 
212  20%
 
84  40%

Unigene MembersMember information