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Information for unigene UN16726
| FASTA Sequence |
| Unigene ID: UN16726 | Length: 1054 |
SSR | | GCGCCTTTCAAATTCACTCTCGGTCAAGGTCAGGTTATTAAGGGATGGGATATTGGTATTAAGACTATGAAGAAGGGGAAGGATAT
GAGCGTCCCAACGACGGAGCGGTCGTGAAAGTGAAACTGATAGGGAAACTTGGAGACGGTACTGTATTCCTAAAGAAAGGTCACGG
TGAAGGTGAAGAGCTCTTTGAGTTCAAAACTGATGAAGAGCAAGTGATCGATGGACTTGATAAAGCCGTGATGAAGATGAAGAAGG
GTGAAGTGGCATTGGTGACCATAGACCCAGAGTATGCTTTTGGTTCAACTGAGTCAAAGCAGGAATTAGCTGTGGTGCCGCCAAAC
TCAACCGTCTATTATGAGGTTGACCTTGTGTCTTTCGACAAGGAAAGGGAATCGTGGGACATGAACACTGAGGAGAAGATTGAAGC
TGCCGGTAAGAAGAAGGAAGAAGGAAATGCCAAGTTCAAAGCAGGCAAATATGCACTCGCTTCCAAGAGATACGAGAAGGCTGTCA
AATTCATTGAATACGACTCATCCTTCAGTGAGGAGGAGAAGAAGCAAGCAAAAGCATTGAAAGTGGCGTGCAACCTGAACGACGCA
GCATGCAAACTGAAGCTGAAAGAATACAGGCAGGCTGAAAAGCTATGCACAAAGGTGCTAGAGCTGGAAAGCACCAATGTGAAAGC
TCTTTACAGGAGAGCGCAGGCCTACATGGAGTTGGCTGATTTGGACTTGGCCGAGTTTGATGTCAAGAAGGCCCTTGAAATTGATC
CCGATAACAGGGAAGTGAAGGTGGAGCAGAGAAGGTTGAAGGAGAAAATGAAGGAGTTCAACAAAAAGGAGGCCAAGTTTTACGGA
AACATGTTTGCAAAACTATTTAAGTGAAGCAGCAGCAGCAGCAGCAGCGTCATGGGGAATAGCTTTGGATGTTTTTCTCGTTTATG
TATCTTTGCCTAATTTCCATTTAAGTTGTGTTTTTAGATGAGACCTTCAAGACATTGTTGTTCTTTATTAAATGTTAGCTTTGATA
ATTTATAATCGAGATACTTATC
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| GenBank top hits (Blast detail) | Score | e value |
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| XP_002883594 peptidylprolyl isomerase [Arabidopsis lyrata subsp. lyrata] | 1278 | 2e-138 |
| NP_189160 rotamase FKBP 1 [Arabidopsis thaliana] | 1276 | 3e-138 |
| AAB82061 rof1 [Arabidopsis thaliana] | 1275 | 4e-138 |
| BAB02082 peptidylprolyl isomerase; FK506-binding protein [Arabidopsis thaliana] | 1273 | 6e-138 |
| NP_001118695 rotamase FKBP 1 [Arabidopsis thaliana] | 1273 | 6e-138 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q38931 70 kDa peptidyl-prolyl isomerase | 1276 | 1e-139 |
| Q43207 70 kDa peptidyl-prolyl isomerase | 1078 | 1e-116 |
| Q9TRY0 Peptidyl-prolyl cis-trans isomerase FKBP4 | 533 | 2e-053 |
| P27124 Peptidyl-prolyl cis-trans isomerase FKBP4 | 527 | 9e-053 |
| Q02790 Peptidyl-prolyl cis-trans isomerase FKBP4 | 524 | 2e-052 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B3H746 Uncharacterized protein At3g25230.2 | 1273 | 4e-138 |
| B9TA12 Peptidylprolyl isomerase, putative | 1191 | 1e-128 |
| B9GQN7 Predicted protein | 1184 | 9e-128 |
| B9T7Z2 Peptidylprolyl isomerase, putative | 1184 | 9e-128 |
| Q0WSA8 Peptidylprolyl isomerase | 1112 | 2e-119 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G25230.1 ROF1 (ROTAMASE FKBP 1); FK506 binding / calmodulin binding / peptidyl-prolyl cis-trans isomerase | 1276 | 1e-140 |
| AT3G25230.2 ROF1 (ROTAMASE FKBP 1); FK506 binding / calmodulin binding / peptidyl-prolyl cis-trans isomerase | 1273 | 3e-140 |
| AT5G48570.1 peptidyl-prolyl cis-trans isomerase, putative / FK506-binding protein, putative | 1112 | 1e-121 |
| AT1G58450.1 peptidyl-prolyl cis-trans isomerase FKBP-type family protein | 404 | 1e-039 |
| AT3G54010.1 PAS1 (PASTICCINO 1); FK506 binding / binding / peptidyl-prolyl cis-trans isomerase | 300 | 2e-027 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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