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Information for unigene UN16727
| FASTA Sequence |
| Unigene ID: UN16727 | Length: 885 |
SSR | | CATGCATGCTTCTCAAACTTTGCATTAGAGTTTCTCACACTCTGTAACACATGAAAACAGAGCATTTCACAAAAAGAGAAAAAAAA
GATACACAAACACATAACCAAATAAAGATAGATTTACTTTTGTAAGTTTGTTGGAAAGAAACACAGAAAAAAAGAAAAAGAATCAA
ACTTTGGTCACATACACACACACACACAATGTCGATGGTCTCTTTCAGTTGTACTTCCTCTTCTTGATCTTGAAAGAAGAAGATCG
GATAACGTCGTCATCAGCAGTGAGAACGGACTCGAGGGGAGTGATGGATTCAGGTTTGGTGAAGTAAGTGAAGAGAAGGTAGATAC
CATCGAGGTAAGTGTTAGTCTCTCCTGCTTTGTTTTTCTTCCGGATGCTGTAAGCCAATGGAATCACTCCTCTGTTGAATACTTCC
ACATACATTCCTCCCCCAGCCACAAGCAACTCTTCGTACTTCTGGGTGAGACCAAGGCGCTCATCTTCAGACATGTCGGGTCTCAA
GACGGCCATTGTCTCGTACTGTCGGAGACCAGGTGGGCACTGAGGTTCGGGTTTGTCCTCAAGGGCAGTAGAGACGGAAGGGGAAG
AAGGGTCATCGTCGGAGCCGAATCCACCTTCAAAGAAAGTGCCTGAGAAATCAAGAGCCTGTGATTTCACCACCACAGAGCTCTCT
CTCTTCTTCTGCTGCGAGGCAAAAGGTTTGGACTTGGAAACGAATGGCCTGAGGGAACGGGAGAAAGAGAGGAGTGGCTGGGTCGA
GGCATTAGGAAGAGAGTGAGTGCAAACGGGAGAGTTCGATAGGCATACCGAAGACGCCAACATTGTTGTTATTATATGAGATGAGA
GCTAATTAGAAAGAAACAACAGCCC
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| GenBank top hits (Blast detail) | Score | e value |
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| AAF19690 F1N19.8 [Arabidopsis thaliana] | 922 | 2e-097 |
| XP_002886339 ribosomal protein S6 family protein [Arabidopsis lyrata subsp. lyrata] | 914 | 2e-096 |
| NP_176632 30S ribosomal protein S6 alpha [Arabidopsis thaliana] | 908 | 1e-095 |
| XP_002264340 PREDICTED: hypothetical protein [Vitis vinifera] | 679 | 4e-069 |
| XP_002297965 predicted protein [Populus trichocarpa] | 672 | 2e-068 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q8VY91 30S ribosomal protein S6 alpha, chloroplastic | 908 | 5e-097 |
| P82403 30S ribosomal protein S6 alpha, chloroplastic (Fragment) | 651 | 3e-067 |
| Q8R6M1 30S ribosomal protein S6 | 122 | 6e-006 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9GL27 Predicted protein (Fragment) | 672 | 2e-068 |
| C6SVA8 Putative uncharacterized protein | 669 | 4e-068 |
| C6T002 Putative uncharacterized protein | 665 | 1e-067 |
| B9RYN6 Structural constituent of ribosome, putative | 659 | 5e-067 |
| A9NMM3 Putative uncharacterized protein | 496 | 4e-048 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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