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Information for unigene UN16743

FASTA Sequence
Unigene ID: UN16743Length: 607 SSR 
GGACCCATAAACCATAATCATCATATTCATAAAGTTCATAGCTAAGTGAAACGAATCTCACAACAGATAAAAGGACAAACATAACA
TAAAACTAAAAAACAAAACTAATCTGAAGTGAGACTTTTGGATACAAGCATAAATGCCTTTTGTCTCACTTTTCCCAGAATAGATA
CCATAAAACAAGAGATTCAAAACTTAAACAGTAGAGTAAGACAAACTCATCTCATTATTCGTCATCGCTGTCTTTGCTTTTCTTCT
TCTTCTCCTTCTTTTTCTTCTTCTCACTCTTCTCTGCTGATTCACCACCACCAGCTTCATCTGTCTCTTTGTCCTTCTTTTTCTTC
TTCTTCTTCTCACTCTTCTCAGCTGGTGATTCATCTTCACCATTAACCGCAGAAGCAGCTTCATCTGTCTCCTTGCTCTTCTTTTT
CTTCTTCTTCTCCGACTTTGGTGTTGCCAACTCTTCTTTATCCTCCTCCTTGTCCTTCTTTTTCTTCTTCTCCTTCTTCTCAGATT
TCACCTTCTCTTCAACCTCAACATCTTTTGTTTCGGCTTTCTTGGAAGACACAGCCGCAGGGCTGTCACTGCTCTCATCATGCTTA
CGCTT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_191274 H/ACA ribonucleoprotein complex subunit 4 [Arabidopsis thaliana]3029e-026
XP_002878134 hypothetical protein ARALYDRAFT_486159 [Arabidopsis lyrata subsp. lyrata]2822e-023
XP_647549 hypothetical protein DDB_G0268098 [Dictyostelium discoideum AX4]2283e-017
EFA85918 MAR-binding protein [Polysphondylium pallidum PN500]2168e-016
XP_002637418 Hypothetical protein CBG19125 [Caenorhabditis briggsae]2122e-015

Swiss-Prot top hits (Blast detail)Scoree value
Q9LD90 H/ACA ribonucleoprotein complex subunit 43043e-027
Q55FI4 Nucleolar protein 582282e-018
A5E4P1 Protein PXR12139e-017
Q54T81 Probable H/ACA ribonucleoprotein complex subunit 41994e-015
P36044 Protein MNN41896e-014

TrEMBL top hits (Blast detail)Scoree value
C0SVF3 Putative uncharacterized protein At3g57150 (Fragment)3026e-026
D3AY91 MAR-binding protein2166e-016
C4M402 Putative uncharacterized protein2112e-015
A2F9I8 Putative uncharacterized protein2103e-015
Q876D1 MNN4 (Fragment)2068e-015

Arabidopsis top hits (Blast detail)Scoree value
AT3G57150.1 NAP57 (Arabidopsis thaliana homologue of NAP57); pseudouridine synthase3043e-028
AT5G40340.1 PWWP domain-containing protein1743e-013
AT1G56660.1 unknown protein1709e-013
AT5G65900.1 DEAD/DEAH box helicase, putative1681e-012
AT3G28770.1 unknown protein1672e-012

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
121  50%
 
91  50%

Unigene MembersMember information