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Information for unigene UN16761

FASTA Sequence
Unigene ID: UN16761Length: 1101 SSR 
CGTATCTTTTGCTATAAAGATCAGTAAGATGGATTAATACATAAACGTTAAGATTCAATTCGATTGCAAGGGAAGAAGGACGATGC
AGTACAAAGAATCTGTACAATAAATATATATATATCTTTAATGTGGTAACTTGTATAGTTTGATCCACTCTTCTTCGGTTGATGCT
TGGAGCTTGGTGCTCAAACCAGGACAACGATGATGACAATGAGTATAACAATCCCAAATATGAGAATAAGAAGGCATGTCAAGGAT
GAGTTTGCTCTTTGAGTTTTAGATGCTTTTCTGAGTTGGGAAGTGGCTTGTGCAGTTGCAGCATGTGAATTATCAATGTTGGAGCT
GATGTCATCGATCATAACTCCTTGATCGTTCACTAAAACAGCTAGATCTTTGAAGATTTCATTCACTTCACCAATCTGTTCTTGAA
TTTCTCTGATTCCTTGCTCTCTTTCCTCAATAATTGCTTCATTGAATGTTATCTCGTTATCTAGAAACACCACTTCTTGCCTTTTT
GATTGTAGAAGAAGAGTTTGCTCCTGGGAGGTCCTTAAAGATTCAATATCCAGTTCCTGTGCATTATAACTGGTAGGCATATCTTT
AGTGACGACAGGAGTATATGTTAATTCTCTCTCAGCTGCAAGTCTCTGAGCTTTCTGAAACTCTTTGAGAACTGATTGGAAATCTT
TCGCCAGTTTAGCATCCGCAATCTTCTTAATTGGAGTAGAAGCTCCATGGAGGTCGGCTTCGCTAGCCTCTTTAAGCTTAGCTGAC
GTATTTTTCACCAGTTCTGATATCTGTAACCTTGTCTTTTGCAGCTTATCTCGCAAATCGAGAGTATCCTTAGGCGTTCCGATCGA
ATTAACGAGGCGGAAGAAGGAATTGACGGCCGTGCTGATCCTGAAAATCCCGGCGGCTACCTCCTGAGACGGATCTCCACGAGACA
GAGGTTTCTGCTGCTGCCTCCTCCCGCCGGTGAAACGATTCGGCGATTGGAATCGAGAGCCAGCCTCGAGATCTTGGAAACTCATC
TTCTTCTTCTTCTCTCTCGAATCTAATCTCTCTAGCAATGGGGAATGATGATTGGCAAGAGTTAGGTCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
ABB83612 syntaxin-like protein [Brassica oleracea]12522e-135
XP_002873796 hypothetical protein ARALYDRAFT_488543 [Arabidopsis lyrata subsp. lyrata]12128e-131
NP_197185 syntaxin-21 [Arabidopsis thaliana]11742e-126
AAM66128 syntaxin homologue [Arabidopsis thaliana]11698e-126
XP_002274100 PREDICTED: hypothetical protein [Vitis vinifera]8902e-093

Swiss-Prot top hits (Blast detail)Scoree value
Q39233 Syntaxin-2111749e-128
P93654 Syntaxin-228191e-086
O04378 Syntaxin-237187e-075
Q9C615 Putative syntaxin-244776e-047
O15400 Syntaxin-73307e-030

TrEMBL top hits (Blast detail)Scoree value
A6M8U5 Syntaxin-like protein12521e-135
Q1WW70 At5g1683011741e-126
C6TA84 Putative uncharacterized protein8855e-093
Q8LJR4 Syntaxin8855e-093
A5BYQ4 Putative uncharacterized protein8676e-091

Arabidopsis top hits (Blast detail)Scoree value
AT5G16830.1 SYP21 (SYNTAXIN OF PLANTS 21); SNAP receptor11846e-130
AT5G46860.1 VAM3; SNAP receptor8191e-087
AT4G17730.2 SYP23 (SYNTAXIN OF PLANTS 23); SNAP receptor7204e-076
AT4G17730.1 SYP23 (SYNTAXIN OF PLANTS 23); SNAP receptor7186e-076
AT1G32270.1 ATSYP24; SNAP receptor/ protein binding4775e-048

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
96  75%
 
82  25%

Unigene MembersMember information