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Information for unigene UN16770
| FASTA Sequence |
| Unigene ID: UN16770 | Length: 792 |
SSR | | GGACACTGTAACATTTTCTCTGAACGCATCTATGGCTGCTCTGTTTCTCTCACTTCTCCTTCTAGTTCTAGCCATGGCTGACCATT
CCAGTGCCTCATGGTGTGTGTGCAAAGGCCTGAGTGATGATGTGTTACAGAAGACCATAGACTATGCTTGTGGAAATGGAGCAGGC
TGTAACCCCATTCACCCAAAAGCACCTTGCTTTAACCCTGACAATGTTAGGTCTCATTGCAACTATGCAGTCAACAGCTTCTTCCA
AAAGAAGCGTCAAGCTTCAGGCACTTGTGATTTCAGTGGCACTGCCACTCCTACTAACTCCGATCCAAGTTATTCAGGATGTACCT
TTCCTACTAGTGCCAGCGGCTCTGGAGGCAGCACTACTGTGACACCAGGCACAACCAATCCAAAAGGCAGCTCAACAAGCACCACA
CTTCCTGGTGGCAACAGTCCTTATTCAGGAACCTCAACCAATGGGGTTTTTGGGAACAATAGCACAGGAGCCAACGGGACAGGGGT
TAACCCGGACTACACGACAGAAAGCAGCGCGTTTGTTCTCAAGAACTCAAGCAAACTGCTCACCTTCCTTGTCTTGATCGCCTCGA
GTGGATTTTGTTCTTTCTTGATACTCTAAGGATGTTCATGTTCCCCTGGTTTTGTTGTTGCAACTTATTGTATTAAAGACATTGGT
CTAGCTTTAGATGGTAATCTATCTGTCTGTGTGTTTTGAGTCTCTCTCTCTCTATGTTATGTTCTTGTTGTAAGAAGATTTCAGCT
CTTGCTTGTACTCTTACG
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002866419 hypothetical protein ARALYDRAFT_919353 [Arabidopsis lyrata subsp. lyrata] | 822 | 8e-086 |
| NP_200921 glucan endo-1,3-beta-glucosidase-like protein 2 [Arabidopsis thaliana] | 813 | 9e-085 |
| NP_196417 glucan endo-1,3-beta-glucosidase-like protein 3 [Arabidopsis thaliana] | 687 | 4e-070 |
| AAM64809 unknown [Arabidopsis thaliana] | 687 | 4e-070 |
| XP_002871299 hypothetical protein ARALYDRAFT_350051 [Arabidopsis lyrata subsp. lyrata] | 665 | 1e-067 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9FNQ2 Glucan endo-1,3-beta-glucosidase-like protein 2 | 818 | 1e-086 |
| Q9SD84 Glucan endo-1,3-beta-glucosidase-like protein 3 | 687 | 2e-071 |
| Q93V72 Glucan endo-1,3-beta-glucosidase-like protein At1g69295 | 352 | 1e-032 |
| Q9M069 Glucan endo-1,3-beta-glucosidase 7 | 253 | 3e-021 |
| Q94CD8 Glucan endo-1,3-beta-glucosidase 4 | 225 | 6e-018 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| A9PAS0 Putative uncharacterized protein | 477 | 6e-046 |
| Q9FZ86 At1g18650 | 444 | 4e-042 |
| C6T016 Putative uncharacterized protein | 440 | 1e-041 |
| C6TNI5 Putative uncharacterized protein | 419 | 3e-039 |
| A5AZD0 Putative uncharacterized protein | 418 | 4e-039 |
| Arabidopsis top hits (Blast detail) | Score | e value |
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| AT5G61130.1 PDCB1 (PLASMODESMATA CALLOSE-BINDING PROTEIN 1); callose binding / polysaccharide binding | 819 | 7e-088 |
| AT5G08000.1 E13L3 (GLUCAN ENDO-1,3-BETA-GLUCOSIDASE-LIKE PROTEIN 3); callose binding / polysaccharide binding | 687 | 2e-072 |
| AT1G18650.1 PDCB3 (PLASMODESMATA CALLOSE-BINDING PROTEIN 3); callose binding / polysaccharide binding | 444 | 2e-044 |
| AT1G69295.1 PDCB4 (PLASMODESMATA CALLOSE-BINDING PROTEIN 4); callose binding / polysaccharide binding | 352 | 1e-033 |
| AT1G13830.1 beta-1,3-glucanase-related | 341 | 2e-032 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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